UHGV-0147693

Genome information

Genome length 28,644 bps

CDS count 46

Completeness 74.41% (medium-quality)

geNomad score 0.9798

Prediction confidence Confident

Genome information
Genome ID	UHGV-0147693
vOTU ID	vOTU-027270
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_412749
BioSample	SAMN05414923
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	74.41% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9798
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.6
Jumbo phage	No

Genome content
Genome length	28,644 bps
GC content	60.22%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	46
CDS density	92.61%
Average CDS length	579.91 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0147693_2	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0147693_2	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0147693_2	UniRef90	UniRef90_UPI000318E277	ParA family protein	NA
UHGV-0147693_2	eggNOG-mapper	1007096.BAGW01000033_gene1614	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-0147693_2	Pfam	PF13614	AAA domain	AAA_31
UHGV-0147693_2	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0147693_2	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0147693_3	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0147693_3	PHROG	phrog_27290	NA	unknown function
UHGV-0147693_3	UniRef90	UniRef90_UPI0003130F10	ParB N-terminal domain-containing protein	NA
UHGV-0147693_3	eggNOG-mapper	1007096.BAGW01000033_gene1613	ParB-like nuclease domain	NA
UHGV-0147693_3	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0147693_3	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0147693_3	Structural annotation	PF12961, PF02195, MF_02015, MF_00684, TIGR04285, NF003443, COG1475, COG3097	NA	NA
UHGV-0147693_5	eggNOG-mapper	693746.OBV_19880	NA	NA
UHGV-0147693_7	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0147693_7	Structural annotation	NF040595	NA	NA
UHGV-0147693_9	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0147693_9	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0147693_9	UniRef90	UniRef90_UPI0002D3AA8D	single-stranded DNA-binding protein	NA
UHGV-0147693_9	eggNOG-mapper	693746.OBV_19910	Single-strand binding protein family	NA
UHGV-0147693_9	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0147693_9	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0147693_9	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0147693_9	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0147693_9	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0147693_10	UniRef90	UniRef90_A0A2V2EEG3	NA	NA
UHGV-0147693_10	Pfam	PF04448	NA	DUF551
UHGV-0147693_10	Structural annotation	PF04448	NA	NA
UHGV-0147693_11	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0147693_11	eggNOG-mapper	742738.HMPREF9460_04063	NA	NA
UHGV-0147693_11	Structural annotation	PF01446	NA	NA
UHGV-0147693_12	UniRef90	UniRef90_UPI001F232519	cysteine-rich KTR domain-containing protein	NA
UHGV-0147693_12	eggNOG-mapper	1226322.HMPREF1545_00110	Cysteine-rich KTR	NA
UHGV-0147693_12	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-0147693_12	Structural annotation	PF14205	NA	NA
UHGV-0147693_13	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0147693_13	UniRef90	UniRef90_UPI001BB476DD	HNH endonuclease	NA
UHGV-0147693_13	eggNOG-mapper	693746.OBV_19960	HNH endonuclease	NA
UHGV-0147693_13	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0147693_13	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0147693_13	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0147693_14	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0147693_14	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0147693_14	UniRef90	UniRef90_UPI00067ECD6A	ParB/Srx family N-terminal domain-containing protein	NA
UHGV-0147693_14	eggNOG-mapper	1304284.L21TH_2620	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0147693_14	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0147693_14	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0147693_14	COG	COG0863	DNA modification methylase	NA
UHGV-0147693_16	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0147693_16	UniRef90	UniRef90_UPI001EDE2A13	phage terminase small subunit P27 family	NA
UHGV-0147693_16	eggNOG-mapper	1007096.BAGW01000012_gene2373	Phage terminase, small subunit	NA
UHGV-0147693_16	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0147693_16	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0147693_16	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0147693_16	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0147693_17	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0147693_17	UniRef90	UniRef90_UPI001EDD9CE6	terminase large subunit	NA
UHGV-0147693_17	eggNOG-mapper	742738.HMPREF9460_00872	Phage Terminase	NA
UHGV-0147693_17	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0147693_17	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0147693_17	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0147693_17	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0147693_19	PHROG	phrog_12	portal protein	head and packaging
UHGV-0147693_19	UniRef90	UniRef90_A0A7X3AS02	Phage portal protein	NA
UHGV-0147693_19	eggNOG-mapper	1007096.BAGW01000012_gene2376	Phage portal protein	NA
UHGV-0147693_19	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0147693_19	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0147693_19	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0147693_19	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0147693_20	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0147693_20	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0147693_20	UniRef90	UniRef90_A0A7X3DIS9	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0147693_20	eggNOG-mapper	742738.HMPREF9460_00875	Clp protease	NA
UHGV-0147693_20	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0147693_20	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0147693_20	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0147693_21	PHROG	phrog_10	major head protein	head and packaging
UHGV-0147693_21	UniRef90	UniRef90_A0A7X3DGW7	Phage major capsid protein	NA
UHGV-0147693_21	eggNOG-mapper	742738.HMPREF9460_00876	Phage capsid family	NA
UHGV-0147693_21	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0147693_21	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0147693_21	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0147693_21	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0147693_22	eggNOG-mapper	693746.OBV_20050	NA	NA
UHGV-0147693_22	Structural annotation	PF03898, NF033675	NA	NA
UHGV-0147693_23	UniRef90	UniRef90_A0A7X3DJ64	Phage gp6-like head-tail connector protein	NA
UHGV-0147693_23	eggNOG-mapper	693746.OBV_20060	NA	NA
UHGV-0147693_23	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0147693_23	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0147693_25	PHROG	phrog_2655	excisionase	integration and excision
UHGV-0147693_25	UniRef90	UniRef90_A0A7X3AR57	NA	NA
UHGV-0147693_25	eggNOG-mapper	665956.HMPREF1032_00099	NA	NA
UHGV-0147693_25	Pfam	PF10387	NA	DUF2442
UHGV-0147693_25	Pfam	PF20038	Helix-turn-helix domain	HTH_59
UHGV-0147693_26	PHROG	phrog_14333	NA	unknown function
UHGV-0147693_26	UniRef90	UniRef90_A0A7X3AR62	NA	NA
UHGV-0147693_26	eggNOG-mapper	1045858.Bint_0544	NA	NA
UHGV-0147693_26	Pfam	PF13711	NA	DUF4160
UHGV-0147693_26	Structural annotation	PF13711	NA	NA
UHGV-0147693_27	PHROG	phrog_25	head closure Hc1	connector
UHGV-0147693_27	UniRef90	UniRef90_A0A7X3ASG9	Head-tail adaptor protein	NA
UHGV-0147693_27	eggNOG-mapper	97138.C820_00612	Phage head-tail adaptor	NA
UHGV-0147693_27	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0147693_27	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0147693_27	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0147693_28	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0147693_28	UniRef90	UniRef90_UPI001C02CC0B	HK97 gp10 family phage protein	NA
UHGV-0147693_28	eggNOG-mapper	469617.FUAG_01842	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0147693_28	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0147693_28	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0147693_29	PHROG	phrog_525	NA	unknown function
UHGV-0147693_29	eggNOG-mapper	632245.CLP_2913	NA	NA
UHGV-0147693_29	Pfam	PF20765	NA	DUF6838
UHGV-0147693_29	Structural annotation	PF20765, TIGR01633, COG5003	NA	NA
UHGV-0147693_30	PHROG	phrog_1480	tail sheath	tail
UHGV-0147693_30	UniRef90	UniRef90_A0A7X3ARB4	Phage tail protein	NA
UHGV-0147693_30	eggNOG-mapper	97138.C820_00609	Phage tail sheath C-terminal domain	NA
UHGV-0147693_30	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0147693_30	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0147693_31	PHROG	phrog_365	tail protein	tail
UHGV-0147693_31	UniRef90	UniRef90_A0A7X3ARL5	Terminase	NA
UHGV-0147693_31	eggNOG-mapper	641107.CDLVIII_1345	Phage tail tube protein	NA
UHGV-0147693_31	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0147693_31	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0147693_32	PHROG	phrog_4976	tail assembly chaperone	tail
UHGV-0147693_32	eggNOG-mapper	1203606.HMPREF1526_01346	NA	NA
UHGV-0147693_32	Structural annotation	PF08890, TIGR01674	NA	NA
UHGV-0147693_33	PHROG	phrog_973	tail length tape measure protein	tail
UHGV-0147693_33	UniRef90	UniRef90_A0A3F2ZYT8	Putative prophage LambdaBa01, membrane protein	NA
UHGV-0147693_33	eggNOG-mapper	632245.CLP_2908	phage tail tape measure protein	NA
UHGV-0147693_33	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0147693_33	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0147693_34	PHROG	phrog_5184	NA	unknown function
UHGV-0147693_34	UniRef90	UniRef90_UPI000F05162E	phage portal protein	NA
UHGV-0147693_34	eggNOG-mapper	1007103.AFHW01000034_gene2068	protein containing LysM domain	NA
UHGV-0147693_34	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0147693_34	Structural annotation	PF19266, TIGR02126, COG3499	NA	NA
UHGV-0147693_35	PHROG	phrog_400	tail protein	tail
UHGV-0147693_35	UniRef90	UniRef90_A0A1C6BFH5	Peptidase C51 domain-containing protein	NA
UHGV-0147693_35	eggNOG-mapper	1203606.HMPREF1526_01350	Late control gene D protein	NA
UHGV-0147693_35	COG	COG3500	NA	NA
UHGV-0147693_35	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0147693_36	Structural annotation	PF10844	NA	NA
UHGV-0147693_37	UniRef90	UniRef90_UPI001C010E9D	NA	NA
UHGV-0147693_37	eggNOG-mapper	1203606.HMPREF1526_01352	NA	NA
UHGV-0147693_37	Pfam	PF10934	NA	DUF2634
UHGV-0147693_37	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0147693_37	Structural annotation	PF10934, MF_02010, NF010728, COG4381	NA	NA
UHGV-0147693_38	PHROG	phrog_6	baseplate protein	tail
UHGV-0147693_38	UniRef90	UniRef90_A0A7X3DGX1	Baseplate J/gp47 family protein	NA
UHGV-0147693_38	eggNOG-mapper	1203606.HMPREF1526_01353	Baseplate J-like protein	NA
UHGV-0147693_38	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0147693_38	COG	COG3299	NA	NA
UHGV-0147693_38	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0147693_39	PHROG	phrog_521	tail protein	tail
UHGV-0147693_39	UniRef90	UniRef90_UPI001C00D44E	NA	NA
UHGV-0147693_39	eggNOG-mapper	1120998.AUFC01000013_gene2954	NA	NA
UHGV-0147693_39	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0147693_39	COG	COG3778	NA	NA
UHGV-0147693_39	Structural annotation	PF10076, TIGR02242, COG3778	NA	NA
UHGV-0147693_40	UniRef90	UniRef90_A0A4D7AHL6	Collagen-like protein	NA
UHGV-0147693_40	eggNOG-mapper	1226322.HMPREF1545_00064	NA	NA
UHGV-0147693_41	eggNOG-mapper	1226322.HMPREF1545_00064	NA	NA
UHGV-0147693_41	Structural annotation	PF18459	NA	NA
UHGV-0147693_43	eggNOG-mapper	1408437.JNJN01000040_gene189	NA	NA
UHGV-0147693_45	KOfam	K03733	xerC; integrase/recombinase XerC	NA
UHGV-0147693_45	PHROG	phrog_1	integrase	integration and excision
UHGV-0147693_45	UniRef90	UniRef90_UPI001C0284BF	tyrosine-type recombinase/integrase	NA
UHGV-0147693_45	eggNOG-mapper	1226322.HMPREF1545_00778	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0147693_45	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0147693_45	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0147693_45	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0147693_45	Structural annotation	PF00589, PF02899, MF_01808, TIGR02225, COG4974	NA	NA
UHGV-0147693_46	UniRef90	UniRef90_UPI00164D2830	phosphodiester glycosidase family protein	NA