UHGV-0148054

Genome information

Genome length 30,997 bps

CDS count 50

Completeness 90.13% (high-quality)

geNomad score 0.9782

Prediction confidence Confident

Genome information
Genome ID	UHGV-0148054
vOTU ID	vOTU-066898
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_404754
BioSample	SAMN05414919
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.13% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	24
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9782
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	64.28
Jumbo phage	No

Genome content
Genome length	30,997 bps
GC content	39.81%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	50
CDS density	92.51%
Average CDS length	576.90 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0148054_2	PHROG	phrog_803	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0148054_2	UniRef90	UniRef90_UPI001039D6AD	integrase	NA
UHGV-0148054_2	eggNOG-mapper	1002809.SSIL_1411	NA	NA
UHGV-0148054_5	KOfam	K07505	repA; regulatory protein RepA	NA
UHGV-0148054_5	PHROG	phrog_2597	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0148054_5	UniRef90	UniRef90_UPI000404F782	AAA family ATPase	NA
UHGV-0148054_5	eggNOG-mapper	1123263.AUKY01000015_gene1593	Primase C terminal 2 (PriCT-2)	NA
UHGV-0148054_5	Pfam	PF08707	Primase C terminal 2 (PriCT-2)	PriCT_2
UHGV-0148054_5	Pfam	PF13481	AAA domain	AAA_25
UHGV-0148054_5	COG	COG3598	RecA-family ATPase	NA
UHGV-0148054_5	Structural annotation	PF13481, PF16793, PF08220, MF_00350, MF_00700, NF006606, NF001641, COG3598, COG3285	NA	NA
UHGV-0148054_6	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0148054_6	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0148054_6	UniRef90	UniRef90_UPI000CF97872	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0148054_6	eggNOG-mapper	1123263.AUKY01000072_gene2102	Endodeoxyribonuclease RusA	NA
UHGV-0148054_6	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0148054_6	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0148054_6	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0148054_7	PHROG	phrog_2698	NA	unknown function
UHGV-0148054_7	UniRef90	UniRef90_UPI00148D30D4	NA	NA
UHGV-0148054_7	eggNOG-mapper	1232449.BAHV02000010_gene2698	NA	NA
UHGV-0148054_8	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0148054_8	UniRef90	UniRef90_UPI0007C86507	AAA family ATPase	NA
UHGV-0148054_8	eggNOG-mapper	754027.HMPREF9554_00709	NA	NA
UHGV-0148054_8	Pfam	PF13479	AAA domain	AAA_24
UHGV-0148054_9	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0148054_9	UniRef90	UniRef90_UPI001C017BAC	siphovirus Gp157 family protein	NA
UHGV-0148054_9	eggNOG-mapper	742823.HMPREF9465_00905	Siphovirus Gp157	NA
UHGV-0148054_9	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0148054_9	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0148054_15	UniRef90	UniRef90_A0A1I0VIB3	MazG nucleotide pyrophosphohydrolase domain-containing protein	NA
UHGV-0148054_16	eggNOG-mapper	742765.HMPREF9457_02102	NA	NA
UHGV-0148054_18	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0148054_18	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0148054_18	UniRef90	UniRef90_A0A1E9PGC1	Antirepressor	NA
UHGV-0148054_18	eggNOG-mapper	1123263.AUKY01000072_gene2107	BRO family, N-terminal domain	NA
UHGV-0148054_18	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0148054_18	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0148054_18	COG	COG3617	Prophage antirepressor	NA
UHGV-0148054_18	Structural annotation	PF03374, COG3645	NA	NA
UHGV-0148054_20	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0148054_20	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0148054_20	UniRef90	UniRef90_UPI000CF84712	helix-turn-helix domain-containing protein	NA
UHGV-0148054_20	eggNOG-mapper	1405498.SSIM_05045	Transcriptional	NA
UHGV-0148054_20	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0148054_20	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0148054_20	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0148054_21	PHROG	phrog_2158	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UHGV-0148054_21	UniRef90	UniRef90_A0A1M6HZJ6	Abortive infection bacteriophage resistance protein	NA
UHGV-0148054_21	eggNOG-mapper	877421.AUJT01000010_gene547	Abi-like protein	NA
UHGV-0148054_21	PADLOC	AbiD	AbiD	Abi
UHGV-0148054_21	Pfam	PF07751	Abi-like protein	Abi_2
UHGV-0148054_21	COG	COG4823	Abortive infection bacteriophage resistance protein	NA
UHGV-0148054_21	Structural annotation	PF07751, COG4823	NA	NA
UHGV-0148054_22	KOfam	K14059	int; integrase	NA
UHGV-0148054_22	PHROG	phrog_1	integrase	integration and excision
UHGV-0148054_22	UniRef90	UniRef90_UPI00041838CC	site-specific integrase	NA
UHGV-0148054_22	eggNOG-mapper	1123263.AUKY01000012_gene1957	Pfam:Integrase_AP2	NA
UHGV-0148054_22	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0148054_22	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0148054_22	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0148054_22	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0148054_23	PHROG	phrog_33625	holin	lysis
UHGV-0148054_23	UniRef90	UniRef90_UPI00137381C3	phage holin	NA
UHGV-0148054_23	eggNOG-mapper	1385512.N784_12970	Bacteriophage holin	NA
UHGV-0148054_23	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0148054_23	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0148054_23	COG	COG5546	NA	NA
UHGV-0148054_23	Structural annotation	COG5546	NA	NA
UHGV-0148054_24	eggNOG-mapper	445971.ANASTE_00732	NA	NA
UHGV-0148054_25	KOfam	K07273	acm; lysozyme	NA
UHGV-0148054_25	PHROG	phrog_291	endolysin	lysis
UHGV-0148054_25	UniRef90	UniRef90_UPI001D017004	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0148054_25	eggNOG-mapper	1235798.C817_00299	family 25	NA
UHGV-0148054_25	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0148054_25	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0148054_25	Pfam	PF01476	LysM domain	LysM
UHGV-0148054_25	COG	COG1388	LysM repeat	NA
UHGV-0148054_25	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0148054_27	Pfam	PF09693	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
UHGV-0148054_27	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-0148054_28	Structural annotation	PF10618	NA	NA
UHGV-0148054_29	PHROG	phrog_372	tail protein	tail
UHGV-0148054_29	UniRef90	UniRef90_UPI0011DE390F	NA	NA
UHGV-0148054_29	eggNOG-mapper	764299.STRIC_1425	the current gene model (or a revised gene model) may contain a frame shift	NA
UHGV-0148054_29	Pfam	PF05895	NA	DUF859
UHGV-0148054_29	COG	COG4675	Phage tail collar domain	NA
UHGV-0148054_29	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-0148054_30	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0148054_30	UniRef90	UniRef90_A0A890GYC9	Phage tail protein	NA
UHGV-0148054_30	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-0148054_30	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0148054_30	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0148054_30	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0148054_30	COG	COG4926	Phage-related protein	NA
UHGV-0148054_30	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0148054_31	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0148054_31	UniRef90	UniRef90_A0A2X2UUQ3	Phage putative tail component	NA
UHGV-0148054_31	eggNOG-mapper	1123263.AUKY01000068_gene490	tail component	NA
UHGV-0148054_31	COG	COG4722	Phage-related protein YomH	NA
UHGV-0148054_31	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0148054_32	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0148054_32	UniRef90	UniRef90_A0A1C6EH41	Phage-related protein	NA
UHGV-0148054_32	eggNOG-mapper	12390.Q77MU4_9CAUD	peptidoglycan catabolic process	NA
UHGV-0148054_32	Structural annotation	MF_04138, COG5281	NA	NA
UHGV-0148054_33	PHROG	phrog_1633	NA	unknown function
UHGV-0148054_33	UniRef90	UniRef90_A0A139QHL2	NA	NA
UHGV-0148054_33	eggNOG-mapper	1321820.HMPREF1983_00925	NA	NA
UHGV-0148054_33	Structural annotation	PF17318	NA	NA
UHGV-0148054_34	PHROG	phrog_1526	NA	unknown function
UHGV-0148054_35	PHROG	phrog_117	major tail protein	tail
UHGV-0148054_35	UniRef90	UniRef90_A0A3E5D5Z0	Phage tail protein	NA
UHGV-0148054_35	eggNOG-mapper	1121864.OMO_02158	domain, Protein	NA
UHGV-0148054_35	COG	COG5492	NA	NA
UHGV-0148054_35	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0148054_36	PHROG	phrog_123	tail terminator	connector
UHGV-0148054_36	UniRef90	UniRef90_A0A2A5RIK6	NA	NA
UHGV-0148054_36	eggNOG-mapper	875454.BAEW01000017_gene1591	NA	NA
UHGV-0148054_36	Structural annotation	PF06141	NA	NA
UHGV-0148054_37	PHROG	phrog_387	neck protein	connector
UHGV-0148054_37	UniRef90	UniRef90_A0A0E4H9B2	NA	NA
UHGV-0148054_37	eggNOG-mapper	1289597.M1PKU8_9CAUD	NA	NA
UHGV-0148054_38	PHROG	phrog_501	head closure Hc1	connector
UHGV-0148054_38	UniRef90	UniRef90_A0A139QHM6	Phage-associated protein	NA
UHGV-0148054_38	eggNOG-mapper	157924.Q7Y4I1_9CAUD	NA	NA
UHGV-0148054_38	Structural annotation	PF12206, COG5614	NA	NA
UHGV-0148054_39	PHROG	phrog_137	head-tail adaptor Ad1	connector
UHGV-0148054_39	UniRef90	UniRef90_UPI000C83D02F	phage Gp19/Gp15/Gp42 family protein	NA
UHGV-0148054_39	eggNOG-mapper	706433.HMPREF9430_01264	Phage protein Gp19/Gp15/Gp42	NA
UHGV-0148054_39	Pfam	PF09355	NA	Phage_Gp19
UHGV-0148054_39	Structural annotation	PF09355	NA	NA
UHGV-0148054_41	PHROG	phrog_32396	NA	unknown function
UHGV-0148054_41	UniRef90	UniRef90_A0A7X2NQN8	Phage major capsid protein	NA
UHGV-0148054_41	eggNOG-mapper	706433.HMPREF9430_01265	Phage capsid family	NA
UHGV-0148054_41	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0148054_41	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0148054_41	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0148054_42	PHROG	phrog_233	head scaffolding protein	head and packaging
UHGV-0148054_42	UniRef90	UniRef90_A0A890GYE3	NA	NA
UHGV-0148054_42	eggNOG-mapper	706433.HMPREF9430_01266	NA	NA
UHGV-0148054_42	Pfam	PF14265	NA	DUF4355
UHGV-0148054_42	Structural annotation	PF14265	NA	NA
UHGV-0148054_43	PHROG	phrog_17688	NA	unknown function
UHGV-0148054_43	UniRef90	UniRef90_E7MNZ6	Putative phage terminase, large subunit	NA
UHGV-0148054_43	eggNOG-mapper	706433.HMPREF9430_01267	phage terminase, large subunit	NA
UHGV-0148054_43	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0148054_43	Structural annotation	PF20441, PF03354, MF_04146, NF033889, COG4626	NA	NA
UHGV-0148054_46	PHROG	phrog_3675	NA	unknown function
UHGV-0148054_46	UniRef90	UniRef90_UPI001C385ABB	YjcQ family protein	NA
UHGV-0148054_46	eggNOG-mapper	1111134.HMPREF1253_1941	YjcQ protein	NA
UHGV-0148054_46	Pfam	PF09639	YjcQ protein	YjcQ
UHGV-0148054_46	Structural annotation	PF09639, TIGR04176, COG2345	NA	NA
UHGV-0148054_47	UniRef90	UniRef90_R6QRM6	Minor capsid protein	NA
UHGV-0148054_47	eggNOG-mapper	1121335.Clst_0388	NA	NA
UHGV-0148054_48	PHROG	phrog_2494	minor head protein	head and packaging
UHGV-0148054_48	eggNOG-mapper	1321784.HMPREF1987_01068	cell adhesion	NA
UHGV-0148054_48	COG	COG2369	NA	NA
UHGV-0148054_48	Structural annotation	PF14076	NA	NA
UHGV-0148054_49	PHROG	phrog_104	portal protein	head and packaging
UHGV-0148054_49	UniRef90	UniRef90_A0A890GW77	Phage portal protein	NA
UHGV-0148054_49	eggNOG-mapper	706433.HMPREF9430_01270	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0148054_49	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA