UHGV-0148432

Genome information

vOTU vOTU-021902

Genome length 40,154 bps

CDS count 70

Completeness 67.38% (medium-quality)

geNomad score 0.9671

Prediction confidence Confident

Genome information
Genome ID	UHGV-0148432
vOTU ID	vOTU-021902
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_405632
BioSample	SAMN05414914
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	HMM-based
CheckV completeness	67.38% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	2
Recoded stop codon	No

Viral signal
geNomad score	0.9671
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	46.02
Jumbo phage	No

Genome content
Genome length	40,154 bps
GC content	48.39%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	70
CDS density	90.02%
Average CDS length	523.29 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0148432_1	PHROG	phrog_22683	NA	unknown function
UHGV-0148432_1	UniRef90	UniRef90_A0A3E2U205	NA	NA
UHGV-0148432_1	eggNOG-mapper	1008453.HMPREF9957_0722	NA	NA
UHGV-0148432_1	AcrCatalog	cluster_3962	NA	NA
UHGV-0148432_1	Pfam	PF13783	NA	DUF4177
UHGV-0148432_1	Structural annotation	PF13783, NF008362, COG3499	NA	NA
UHGV-0148432_2	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0148432_2	PHROG	phrog_15001	endolysin	lysis
UHGV-0148432_2	UniRef90	UniRef90_A0A8D9UHF0	PGRP protein	NA
UHGV-0148432_2	eggNOG-mapper	411483.FAEPRAA2165_03397	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0148432_2	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0148432_2	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0148432_2	Structural annotation	PF01510, NF008758, COG5632	NA	NA
UHGV-0148432_3	eggNOG-mapper	394503.Ccel_1297	NA	NA
UHGV-0148432_4	PHROG	phrog_37604	NA	unknown function
UHGV-0148432_4	eggNOG-mapper	457412.RSAG_01109	NA	NA
UHGV-0148432_7	PHROG	phrog_29409	NA	unknown function
UHGV-0148432_7	UniRef90	UniRef90_UPI001EE091E6	isoaspartyl peptidase	NA
UHGV-0148432_8	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0148432_8	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0148432_8	UniRef90	UniRef90_A0A2A7B906	Reverse transcriptase domain-containing protein	NA
UHGV-0148432_8	eggNOG-mapper	552398.HMPREF0866_03096	Reverse transcriptase	NA
UHGV-0148432_8	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0148432_8	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0148432_8	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0148432_8	Structural annotation	PF00078, MF_04065, TIGR04416, COG3344	NA	NA
UHGV-0148432_9	PHROG	phrog_30516	NA	unknown function
UHGV-0148432_9	Structural annotation	PF05635, NF008911	NA	NA
UHGV-0148432_10	PHROG	phrog_582	Arc-like repressor	transcription regulation
UHGV-0148432_10	UniRef90	UniRef90_UPI0010327B00	Arc family DNA-binding protein	NA
UHGV-0148432_10	eggNOG-mapper	1235792.C808_02250	NA	NA
UHGV-0148432_10	Structural annotation	PF16777, TIGR04563, COG4877	NA	NA
UHGV-0148432_11	PHROG	phrog_37900	NA	unknown function
UHGV-0148432_11	UniRef90	UniRef90_A0A329UUZ4	NA	NA
UHGV-0148432_11	eggNOG-mapper	552398.HMPREF0866_03098	NA	NA
UHGV-0148432_11	Pfam	PF19789	NA	DUF6273
UHGV-0148432_11	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0148432_11	Structural annotation	PF19789, PF03785	NA	NA
UHGV-0148432_13	PHROG	phrog_18725	NA	unknown function
UHGV-0148432_13	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0148432_13	Structural annotation	PF13754, COG2372	NA	NA
UHGV-0148432_14	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-0148432_14	PHROG	phrog_11157	NA	unknown function
UHGV-0148432_14	UniRef90	UniRef90_UPI001C10C6DC	Ig-like domain-containing protein	NA
UHGV-0148432_14	eggNOG-mapper	476272.RUMHYD_02867	NA	NA
UHGV-0148432_14	Pfam	PF17957	Bacterial Ig domain	Big_7
UHGV-0148432_14	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0148432_14	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0148432_14	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0148432_16	PHROG	phrog_13879	NA	unknown function
UHGV-0148432_16	eggNOG-mapper	1226322.HMPREF1545_00061	NA	NA
UHGV-0148432_16	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0148432_17	PHROG	phrog_1194	NA	unknown function
UHGV-0148432_17	eggNOG-mapper	1226322.HMPREF1545_00060	NA	NA
UHGV-0148432_17	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0148432_18	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0148432_18	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-0148432_18	eggNOG-mapper	1235797.C816_04182	SLT domain	NA
UHGV-0148432_18	COG	COG1511	NA	NA
UHGV-0148432_18	Structural annotation	PF16789, TIGR02473	NA	NA
UHGV-0148432_19	PHROG	phrog_706	NA	unknown function
UHGV-0148432_19	UniRef90	UniRef90_UPI00164D7633	Gp15 family bacteriophage protein	NA
UHGV-0148432_19	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-0148432_19	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0148432_19	Structural annotation	PF06854	NA	NA
UHGV-0148432_20	PHROG	phrog_11299	NA	unknown function
UHGV-0148432_20	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0148432_20	Structural annotation	PF10666	NA	NA
UHGV-0148432_21	PHROG	phrog_3099	NA	unknown function
UHGV-0148432_21	eggNOG-mapper	1226322.HMPREF1545_00056	NA	NA
UHGV-0148432_21	Structural annotation	TIGR02126	NA	NA
UHGV-0148432_22	PHROG	phrog_3266	tail completion	connector
UHGV-0148432_22	UniRef90	UniRef90_A0A2Z4QA01	Minor capsid protein	NA
UHGV-0148432_22	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0148432_22	Structural annotation	PF12691	NA	NA
UHGV-0148432_23	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0148432_23	UniRef90	UniRef90_A0A2U1BEM0	Minor capsid protein	NA
UHGV-0148432_23	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0148432_23	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0148432_23	Structural annotation	PF11114	NA	NA
UHGV-0148432_24	PHROG	phrog_3366	NA	unknown function
UHGV-0148432_24	eggNOG-mapper	642492.Clole_0823	NA	NA
UHGV-0148432_24	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0148432_25	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0148432_25	eggNOG-mapper	642492.Clole_0822	NA	NA
UHGV-0148432_26	PHROG	phrog_212	major head protein	head and packaging
UHGV-0148432_26	UniRef90	UniRef90_A0A354MR33	Phage capsid protein	NA
UHGV-0148432_26	eggNOG-mapper	935836.JAEL01000021_gene1494	NA	NA
UHGV-0148432_26	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0148432_27	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0148432_27	UniRef90	UniRef90_UPI00189CE417	phage scaffolding protein	NA
UHGV-0148432_27	eggNOG-mapper	1232443.BAIA02000078_gene31	NA	NA
UHGV-0148432_27	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0148432_27	Structural annotation	PF06810	NA	NA
UHGV-0148432_28	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0148432_28	UniRef90	UniRef90_A0A1C5N7V1	Phage minor capsid protein 2	NA
UHGV-0148432_28	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0148432_28	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0148432_28	Pfam	PF18451	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
UHGV-0148432_28	COG	COG2369	NA	NA
UHGV-0148432_28	Structural annotation	PF06152	NA	NA
UHGV-0148432_29	PHROG	phrog_533	portal protein	head and packaging
UHGV-0148432_29	UniRef90	UniRef90_UPI0006C81717	phage portal protein	NA
UHGV-0148432_29	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-0148432_29	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0148432_29	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0148432_30	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0148432_30	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0148432_30	UniRef90	UniRef90_A0A2U1BEH4	PBSX family phage terminase large subunit	NA
UHGV-0148432_30	eggNOG-mapper	33035.JPJF01000106_gene3136	Terminase small subunit	NA
UHGV-0148432_30	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0148432_30	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0148432_30	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0148432_30	COG	COG1783	Phage terminase large subunit	NA
UHGV-0148432_30	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0148432_31	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0148432_31	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0148432_31	UniRef90	UniRef90_A0A396NMY4	Terminase small subunit	NA
UHGV-0148432_31	eggNOG-mapper	1235800.C819_00494	Terminase small subunit	NA
UHGV-0148432_31	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0148432_31	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0148432_31	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0148432_32	PHROG	phrog_33130	NA	unknown function
UHGV-0148432_32	UniRef90	UniRef90_A0A3B9CD52	S1-like domain-containing protein	NA
UHGV-0148432_32	Structural annotation	PF10922, MF_00839	NA	NA
UHGV-0148432_33	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0148432_33	UniRef90	UniRef90_A0A4Z0XVP8	RNA polymerase sigma factor SigO	NA
UHGV-0148432_33	eggNOG-mapper	748727.CLJU_c03460	sigma factor activity	NA
UHGV-0148432_33	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0148432_33	Structural annotation	PF07374, MF_00245, TIGR02980, COG2739	NA	NA
UHGV-0148432_38	PHROG	phrog_3777	NA	unknown function
UHGV-0148432_38	UniRef90	UniRef90_A0A417F883	NA	NA
UHGV-0148432_38	eggNOG-mapper	411462.DORLON_00813	NA	NA
UHGV-0148432_38	Pfam	PF12957	NA	DUF3846
UHGV-0148432_38	Structural annotation	PF12957	NA	NA
UHGV-0148432_40	Structural annotation	TIGR04381	NA	NA
UHGV-0148432_42	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0148432_42	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0148432_42	UniRef90	UniRef90_A0A498CNH4	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0148432_42	eggNOG-mapper	477974.Daud_0813	NA	NA
UHGV-0148432_42	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0148432_43	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0148432_43	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0148432_43	UniRef90	UniRef90_UPI001D087498	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0148432_43	eggNOG-mapper	1408437.JNJN01000032_gene2312	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0148432_43	PADLOC	BrxP_00001	BrxP	BREX
UHGV-0148432_43	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0148432_43	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0148432_43	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-0148432_44	PHROG	phrog_9804	NA	unknown function
UHGV-0148432_44	UniRef90	UniRef90_UPI001E312ACC	replicative helicase loader/inhibitor	NA
UHGV-0148432_44	eggNOG-mapper	1121344.JHZO01000003_gene981	Loader and inhibitor of phage G40P	NA
UHGV-0148432_44	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0148432_44	Structural annotation	PF11417	NA	NA
UHGV-0148432_45	PHROG	phrog_2149	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0148432_45	eggNOG-mapper	290402.Cbei_3733	DnaD domain protein	NA
UHGV-0148432_45	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0148432_45	Structural annotation	PF01978, NF000243, COG0735	NA	NA
UHGV-0148432_46	UniRef90	UniRef90_A0A847W0Y2	HTH domain-containing protein	NA
UHGV-0148432_46	Structural annotation	PF21715, COG1654	NA	NA
UHGV-0148432_47	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0148432_47	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0148432_47	UniRef90	UniRef90_A0A3D0Z823	Recombinase RecT	NA
UHGV-0148432_47	eggNOG-mapper	330399.A8ATY6_9CAUD	DNA metabolic process	NA
UHGV-0148432_47	Pfam	PF03837	RecT family	RecT
UHGV-0148432_47	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0148432_47	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0148432_48	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0148432_48	UniRef90	UniRef90_A0A7I8D1X6	YqaJ domain-containing protein	NA
UHGV-0148432_48	eggNOG-mapper	428125.CLOLEP_01823	YqaJ viral recombinase family	NA
UHGV-0148432_48	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0148432_48	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0148432_48	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0148432_48	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0148432_49	Structural annotation	PF13639	NA	NA
UHGV-0148432_53	UniRef90	UniRef90_UPI00148AE9D1	helix-turn-helix transcriptional regulator	NA
UHGV-0148432_53	eggNOG-mapper	1232446.BAIE02000002_gene796	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0148432_53	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0148432_53	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0148432_56	PHROG	phrog_1305	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0148432_56	UniRef90	UniRef90_A0A7X2T575	NA	NA
UHGV-0148432_56	eggNOG-mapper	1235802.C823_04729	NA	NA
UHGV-0148432_56	Pfam	PF13643	NA	DUF4145
UHGV-0148432_56	Structural annotation	PF13643	NA	NA
UHGV-0148432_57	eggNOG-mapper	1232453.BAIF02000057_gene1127	NA	NA
UHGV-0148432_58	PHROG	phrog_3240	NA	unknown function
UHGV-0148432_58	eggNOG-mapper	320841.Q4ZC34_9CAUD	NA	NA
UHGV-0148432_63	PHROG	phrog_582	Arc-like repressor	transcription regulation
UHGV-0148432_63	Pfam	PF03869	Arc-like DNA binding domain	Arc
UHGV-0148432_63	Structural annotation	PF12441, NF041793, COG4710	NA	NA
UHGV-0148432_64	UniRef90	UniRef90_A0A318KGW5	ParD-like antitoxin of type II ParDE toxin-antitoxin system	NA
UHGV-0148432_64	Pfam	PF03869	Arc-like DNA binding domain	Arc
UHGV-0148432_64	Structural annotation	PF03869, TIGR04563, COG4877	NA	NA
UHGV-0148432_65	Pfam	PF07878	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
UHGV-0148432_65	Structural annotation	PF07878, NF041793, COG4877	NA	NA
UHGV-0148432_66	UniRef90	UniRef90_A0A7X5E0G0	XRE family transcriptional regulator	NA
UHGV-0148432_66	eggNOG-mapper	445971.ANASTE_01584	Helix-turn-helix	NA
UHGV-0148432_66	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0148432_66	Structural annotation	PF21291, NF041951, COG1476	NA	NA
UHGV-0148432_67	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0148432_67	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0148432_67	UniRef90	UniRef90_R6BD38	SOS-response transcriptional repressors (RecA-mediated autopeptidases)	NA
UHGV-0148432_67	eggNOG-mapper	1121423.JONT01000002_gene2372	Peptidase S24-like	NA
UHGV-0148432_67	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0148432_67	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0148432_67	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0148432_67	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-0148432_68	PHROG	phrog_5783	NA	unknown function
UHGV-0148432_68	UniRef90	UniRef90_A0A564SC74	NYN domain protein	NA
UHGV-0148432_68	eggNOG-mapper	665956.HMPREF1032_03590	NYN domain	NA
UHGV-0148432_68	Pfam	PF01936	NYN domain	NYN
UHGV-0148432_68	COG	COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	NA
UHGV-0148432_68	Structural annotation	PF01936, TIGR00288, COG1432	NA	NA
UHGV-0148432_69	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0148432_69	PHROG	phrog_95	integrase	integration and excision
UHGV-0148432_69	UniRef90	UniRef90_A0A0V8QI90	Recombinase domain-containing protein	NA
UHGV-0148432_69	eggNOG-mapper	483218.BACPEC_01184	Resolvase, N terminal domain	NA
UHGV-0148432_69	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0148432_69	Pfam	PF07508	Recombinase	Recombinase
UHGV-0148432_69	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0148432_69	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA