UHGV-0148677

Genome information

Genome length 21,046 bps

CDS count 26

Completeness 51.06% (medium-quality)

geNomad score 0.9819

Prediction confidence Confident

Genome information
Genome ID	UHGV-0148677
vOTU ID	vOTU-027337
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_418931
BioSample	NA
Country	Russia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.06% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9819
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.65
Jumbo phage	No

Genome content
Genome length	21,046 bps
GC content	40.27%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	26
CDS density	93.49%
Average CDS length	758.54 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0148677_1	PHROG	phrog_27126	neck protein	connector
UHGV-0148677_1	UniRef90	UniRef90_UPI00177CAE16	SGNH/GDSL hydrolase family protein	NA
UHGV-0148677_1	eggNOG-mapper	1158604.I591_00414	GDSL-like Lipase/Acylhydrolase	NA
UHGV-0148677_1	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0148677_2	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0148677_2	UniRef90	UniRef90_A0A437UJ81	Prophage_tail domain-containing protein	NA
UHGV-0148677_2	eggNOG-mapper	1158612.I580_01364	Prophage endopeptidase tail	NA
UHGV-0148677_2	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0148677_2	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0148677_2	COG	COG4926	Phage-related protein	NA
UHGV-0148677_3	PHROG	phrog_5163	minor tail protein	tail
UHGV-0148677_3	UniRef90	UniRef90_A0A437US85	Phage tail protein	NA
UHGV-0148677_3	eggNOG-mapper	565664.EFXG_01177	Phage tail protein	NA
UHGV-0148677_3	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0148677_3	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0148677_3	COG	COG4722	Phage-related protein YomH	NA
UHGV-0148677_3	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0148677_4	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0148677_4	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-0148677_4	UniRef90	UniRef90_A0A437UJ30	Tape measure protein	NA
UHGV-0148677_4	eggNOG-mapper	1158609.I586_00092	phage tail tape measure protein	NA
UHGV-0148677_4	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0148677_4	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0148677_4	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0148677_4	Structural annotation	PF20155, PF06456, COG3941	NA	NA
UHGV-0148677_5	PHROG	phrog_441	tail assembly chaperone	tail
UHGV-0148677_5	UniRef90	UniRef90_A0A139MCC9	NA	NA
UHGV-0148677_5	eggNOG-mapper	1139219.I569_01371	NA	NA
UHGV-0148677_6	PHROG	phrog_183	tail chaperone protein	tail
UHGV-0148677_6	UniRef90	UniRef90_UPI000CF4E0A6	tail assembly chaperone	NA
UHGV-0148677_6	eggNOG-mapper	85154.O34069_BPO12	Pfam:Phage_TAC_12	NA
UHGV-0148677_6	Pfam	PF12363	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
UHGV-0148677_6	Structural annotation	PF12363	NA	NA
UHGV-0148677_7	PHROG	phrog_238	major tail protein	tail
UHGV-0148677_7	UniRef90	UniRef90_A0A437UJH2	Phage major tail protein, TP901-1 family	NA
UHGV-0148677_7	eggNOG-mapper	565664.EFXG_01173	Phage tail tube protein	NA
UHGV-0148677_7	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0148677_7	NCBIFam	TIGR02126.1	phage major tail protein, TP901-1 family	NA
UHGV-0148677_7	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0148677_8	PHROG	phrog_176	tail terminator	connector
UHGV-0148677_8	UniRef90	UniRef90_A0A437UJ40	Phage capsid protein	NA
UHGV-0148677_8	eggNOG-mapper	1158609.I586_00088	NA	NA
UHGV-0148677_8	Structural annotation	PF11367	NA	NA
UHGV-0148677_9	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0148677_9	UniRef90	UniRef90_UPI001A9C235B	HK97 gp10 family phage protein	NA
UHGV-0148677_9	eggNOG-mapper	1139219.I569_01375	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0148677_9	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0148677_9	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0148677_9	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-0148677_10	PHROG	phrog_348	minor head protein	head and packaging
UHGV-0148677_10	UniRef90	UniRef90_Q38175	B3 protein (Fragment)	NA
UHGV-0148677_10	eggNOG-mapper	1139219.I569_01376	NA	NA
UHGV-0148677_10	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0148677_11	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0148677_11	UniRef90	UniRef90_UPI001A9BE01A	phage head-tail connector protein	NA
UHGV-0148677_11	eggNOG-mapper	1486428.A0A097BY55_9CAUD	Phage gp6-like head-tail connector protein	NA
UHGV-0148677_11	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0148677_11	Structural annotation	PF05135	NA	NA
UHGV-0148677_12	PHROG	phrog_933	NA	unknown function
UHGV-0148677_13	PHROG	phrog_29	major head protein	head and packaging
UHGV-0148677_13	UniRef90	UniRef90_UPI00159D7352	major capsid protein	NA
UHGV-0148677_13	eggNOG-mapper	565664.EFXG_01167	Phage major capsid protein E	NA
UHGV-0148677_13	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0148677_13	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0148677_14	PHROG	phrog_909	major head protein	head and packaging
UHGV-0148677_14	UniRef90	UniRef90_A0A7U8FVR7	NA	NA
UHGV-0148677_14	eggNOG-mapper	565664.EFXG_01166	NA	NA
UHGV-0148677_15	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0148677_15	UniRef90	UniRef90_A0A437UJ37	NA	NA
UHGV-0148677_15	eggNOG-mapper	565664.EFXG_01165	NA	NA
UHGV-0148677_15	Pfam	PF14265	NA	DUF4355
UHGV-0148677_15	Structural annotation	PF14265	NA	NA
UHGV-0148677_16	PHROG	phrog_12801	NA	unknown function
UHGV-0148677_17	PHROG	phrog_34764	NA	unknown function
UHGV-0148677_18	PHROG	phrog_5859	NA	unknown function
UHGV-0148677_18	eggNOG-mapper	1158602.I590_02562	NA	NA
UHGV-0148677_18	Structural annotation	PF03927, MF_02200, NF009840, COG3471	NA	NA
UHGV-0148677_19	Structural annotation	PF02100	NA	NA
UHGV-0148677_20	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0148677_20	UniRef90	UniRef90_A0A200HT95	Phage_Mu_F domain-containing protein	NA
UHGV-0148677_20	eggNOG-mapper	1139219.I569_01382	Phage Mu protein F like protein	NA
UHGV-0148677_20	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0148677_20	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0148677_20	COG	COG2369	NA	NA
UHGV-0148677_20	Structural annotation	PF04233, TIGR01641	NA	NA
UHGV-0148677_21	PHROG	phrog_64	portal protein	head and packaging
UHGV-0148677_21	UniRef90	UniRef90_A0A8B5W1I3	Phage portal protein	NA
UHGV-0148677_21	eggNOG-mapper	565664.EFXG_01159	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0148677_21	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0148677_21	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0148677_21	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-0148677_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0148677_22	PHROG	phrog_5902	NA	unknown function
UHGV-0148677_22	UniRef90	UniRef90_A0A8B5VY09	Terminase B	NA
UHGV-0148677_22	eggNOG-mapper	663241.C9E2I7_9CAUD	NA	NA
UHGV-0148677_22	Pfam	PF13245	AAA domain	AAA_19
UHGV-0148677_22	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG4373	NA	NA
UHGV-0148677_23	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0148677_23	PHROG	phrog_2606	terminase small subunit	head and packaging
UHGV-0148677_23	UniRef90	UniRef90_UPI001157BE84	terminase small subunit	NA
UHGV-0148677_23	eggNOG-mapper	1291743.LOSG293_110370	Terminase small subunit	NA
UHGV-0148677_23	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0148677_23	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0148677_23	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0148677_23	Structural annotation	PF06056, NF040785, COG5484	NA	NA
UHGV-0148677_24	PHROG	phrog_1202	NA	unknown function
UHGV-0148677_24	eggNOG-mapper	1158601.I585_01163	NA	NA
UHGV-0148677_24	Structural annotation	PF18789	NA	NA
UHGV-0148677_25	PHROG	phrog_24047	NA	unknown function
UHGV-0148677_25	eggNOG-mapper	1140002.I570_01449	NA	NA
UHGV-0148677_26	eggNOG-mapper	1139219.I569_00226	NA	NA