UHGV-0148691

Genome information

Genome length 22,716 bps

CDS count 34

Completeness 56.67% (medium-quality)

geNomad score 0.9776

Prediction confidence Confident

Genome information
Genome ID	UHGV-0148691
vOTU ID	vOTU-027338
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_402971
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.67% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9776
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.27
Jumbo phage	No

Genome content
Genome length	22,716 bps
GC content	61.45%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	34
CDS density	94.12%
Average CDS length	630.79 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0148691_1	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0148691_3	PHROG	phrog_38679	NA	unknown function
UHGV-0148691_4	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0148691_4	PHROG	phrog_1794	amidase	lysis
UHGV-0148691_4	UniRef90	UniRef90_F3AKX8	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0148691_4	eggNOG-mapper	658088.HMPREF0987_01102	Ami_2	NA
UHGV-0148691_4	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0148691_4	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0148691_4	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0148691_4	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0148691_4	Structural annotation	PF01510, PF18342, MF_04111, NF008758, NF040670, COG5632	NA	NA
UHGV-0148691_5	PHROG	phrog_1129	holin	lysis
UHGV-0148691_5	UniRef90	UniRef90_A0A1M5CY75	Phage holin family Hol44, holin superfamily V	NA
UHGV-0148691_5	eggNOG-mapper	411473.RUMCAL_01944	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0148691_5	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0148691_5	Structural annotation	PF06946	NA	NA
UHGV-0148691_6	PHROG	phrog_937	hemolysin	other
UHGV-0148691_6	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-0148691_7	PHROG	phrog_372	tail protein	tail
UHGV-0148691_7	UniRef90	UniRef90_A0A3E3E6C0	Pilus assembly protein	NA
UHGV-0148691_7	eggNOG-mapper	556261.HMPREF0240_01282	NA	NA
UHGV-0148691_7	Pfam	PF05895	NA	DUF859
UHGV-0148691_7	COG	COG4675	Phage tail collar domain	NA
UHGV-0148691_7	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-0148691_8	PHROG	phrog_18110	NA	unknown function
UHGV-0148691_8	UniRef90	UniRef90_A0A7V8A6H9	PblB	NA
UHGV-0148691_8	eggNOG-mapper	1235796.C815_00906	NA	NA
UHGV-0148691_8	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0148691_9	PHROG	phrog_1194	NA	unknown function
UHGV-0148691_10	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0148691_10	eggNOG-mapper	1235797.C816_04182	SLT domain	NA
UHGV-0148691_10	COG	COG1511	NA	NA
UHGV-0148691_11	PHROG	phrog_706	NA	unknown function
UHGV-0148691_11	UniRef90	UniRef90_UPI00067E77F7	Gp15 family bacteriophage protein	NA
UHGV-0148691_11	eggNOG-mapper	469596.HMPREF9488_01327	Bacteriophage Gp15 protein	NA
UHGV-0148691_11	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0148691_11	Structural annotation	PF06854	NA	NA
UHGV-0148691_12	Structural annotation	PF10666	NA	NA
UHGV-0148691_13	PHROG	phrog_3099	NA	unknown function
UHGV-0148691_13	eggNOG-mapper	469596.HMPREF9488_01325	NA	NA
UHGV-0148691_13	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0148691_14	PHROG	phrog_3266	tail completion	connector
UHGV-0148691_14	eggNOG-mapper	693746.OBV_18140	NA	NA
UHGV-0148691_14	Structural annotation	PF20765	NA	NA
UHGV-0148691_15	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0148691_15	UniRef90	UniRef90_UPI0015913248	minor capsid protein	NA
UHGV-0148691_15	eggNOG-mapper	1449050.JNLE01000003_gene3886	NA	NA
UHGV-0148691_15	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0148691_15	Structural annotation	PF11114	NA	NA
UHGV-0148691_16	Structural annotation	PF20536, MF_01370, TIGR02126	NA	NA
UHGV-0148691_17	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0148691_17	eggNOG-mapper	693746.OBV_18110	NA	NA
UHGV-0148691_19	PHROG	phrog_422	major head protein	head and packaging
UHGV-0148691_19	UniRef90	UniRef90_W0U896	Phage major capsid protein	NA
UHGV-0148691_19	eggNOG-mapper	693746.OBV_18090	NA	NA
UHGV-0148691_19	Structural annotation	PF05065, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0148691_20	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0148691_20	UniRef90	UniRef90_UPI00164D9F94	phage scaffolding protein	NA
UHGV-0148691_20	eggNOG-mapper	693746.OBV_18080	COG NOG36366 non supervised orthologous group	NA
UHGV-0148691_20	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0148691_20	Structural annotation	PF06810	NA	NA
UHGV-0148691_21	eggNOG-mapper	663278.Ethha_0092	NA	NA
UHGV-0148691_22	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0148691_22	UniRef90	UniRef90_A0A4R1QTM7	Minor capsid protein 2	NA
UHGV-0148691_22	eggNOG-mapper	693746.OBV_18050	Phage minor capsid protein 2	NA
UHGV-0148691_22	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0148691_22	COG	COG2369	NA	NA
UHGV-0148691_22	Structural annotation	PF06152, PF12636	NA	NA
UHGV-0148691_23	PHROG	phrog_353	toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0148691_23	UniRef90	UniRef90_UPI001C11D2DB	type II toxin-antitoxin system HicA family toxin	NA
UHGV-0148691_23	eggNOG-mapper	888060.HMPREF9081_0962	HicA toxin of bacterial toxin-antitoxin,	NA
UHGV-0148691_23	Pfam	PF07927	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
UHGV-0148691_23	COG	COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	NA
UHGV-0148691_23	Structural annotation	PF07927, COG1724	NA	NA
UHGV-0148691_24	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0148691_24	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-0148691_24	UniRef90	UniRef90_UPI001C0F3D37	type II toxin-antitoxin system HicB family antitoxin	NA
UHGV-0148691_24	eggNOG-mapper	1120973.AQXL01000090_gene2616	HicB_like antitoxin of bacterial toxin-antitoxin system	NA
UHGV-0148691_24	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-0148691_24	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0148691_24	Structural annotation	PF15919, COG1598	NA	NA
UHGV-0148691_25	PHROG	phrog_533	portal protein	head and packaging
UHGV-0148691_25	UniRef90	UniRef90_UPI000680A1DB	phage portal protein	NA
UHGV-0148691_25	eggNOG-mapper	693746.OBV_18040	NA	NA
UHGV-0148691_25	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0148691_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0148691_27	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0148691_27	UniRef90	UniRef90_UPI0009E54162	PBSX family phage terminase large subunit	NA
UHGV-0148691_27	eggNOG-mapper	411471.SUBVAR_06507	Phage terminase, large subunit, PBSX family	NA
UHGV-0148691_27	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0148691_27	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0148691_27	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0148691_27	COG	COG1783	Phage terminase large subunit	NA
UHGV-0148691_27	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0148691_28	PHROG	phrog_2412	NA	unknown function
UHGV-0148691_28	eggNOG-mapper	742738.HMPREF9460_02504	NA	NA
UHGV-0148691_29	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0148691_29	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0148691_29	UniRef90	UniRef90_A0A396LJD2	Bro-N domain-containing protein	NA
UHGV-0148691_29	eggNOG-mapper	445971.ANASTE_00714	BRO family, N-terminal domain	NA
UHGV-0148691_29	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0148691_29	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0148691_29	COG	COG3617	Prophage antirepressor	NA
UHGV-0148691_29	Structural annotation	PF02498, PF03374, TIGR02681, COG3617	NA	NA
UHGV-0148691_30	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-0148691_30	UniRef90	UniRef90_UPI001D0837DD	NA	NA
UHGV-0148691_30	eggNOG-mapper	428125.CLOLEP_01806	NA	NA
UHGV-0148691_30	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-0148691_32	PHROG	phrog_5781	NA	unknown function
UHGV-0148691_32	UniRef90	UniRef90_A0A2V2FSM6	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0148691_32	eggNOG-mapper	667121.ET1_08_00770	NA	NA
UHGV-0148691_32	Pfam	PF14359	NA	DUF4406
UHGV-0148691_32	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0148691_32	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0148691_33	PHROG	phrog_3136	NA	unknown function
UHGV-0148691_33	UniRef90	UniRef90_UPI001C26B029	ASCH domain-containing protein	NA
UHGV-0148691_33	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0148691_33	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA