UHGV-0149044

Genome information

Genome length 38,286 bps

CDS count 52

Completeness 99.82% (high-quality)

geNomad score 0.9758

Prediction confidence Confident

Genome information
Genome ID	UHGV-0149044
vOTU ID	vOTU-010505
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_418886
BioSample	NA
Country	Estonia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.82% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9758
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	69.53
Jumbo phage	No

Genome content
Genome length	38,286 bps
GC content	50.14%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	52
CDS density	91.12%
Average CDS length	675.23 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0149044_2	Structural annotation	PF10651, NF009453	NA	NA
UHGV-0149044_3	PHROG	phrog_6616	tail protein	tail
UHGV-0149044_3	UniRef90	UniRef90_A0A0J1FXD9	Peptidase S74 domain-containing protein	NA
UHGV-0149044_3	eggNOG-mapper	1294142.CINTURNW_1042	Phage minor structural protein	NA
UHGV-0149044_3	COG	COG4926	Phage-related protein	NA
UHGV-0149044_3	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0149044_4	PHROG	phrog_1194	NA	unknown function
UHGV-0149044_4	UniRef90	UniRef90_A0A0R1Q5P9	NA	NA
UHGV-0149044_4	eggNOG-mapper	1400520.LFAB_05290	NA	NA
UHGV-0149044_4	Pfam	PF20458	NA	DUF6711
UHGV-0149044_4	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0149044_5	PHROG	phrog_23726	NA	unknown function
UHGV-0149044_5	UniRef90	UniRef90_A0A0M1UTM9	Cell surface domain protein	NA
UHGV-0149044_5	eggNOG-mapper	428125.CLOLEP_01549	cell wall binding repeat	NA
UHGV-0149044_5	COG	COG2247	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	NA
UHGV-0149044_6	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0149044_6	eggNOG-mapper	645991.Sgly_0352	SLT domain	NA
UHGV-0149044_6	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0149044_7	UniRef90	UniRef90_UPI0012BCDD8A	NA	NA
UHGV-0149044_7	eggNOG-mapper	1211844.CBLM010000016_gene1484	NA	NA
UHGV-0149044_7	Structural annotation	PF19591	NA	NA
UHGV-0149044_8	PHROG	phrog_158	major tail protein	tail
UHGV-0149044_8	UniRef90	UniRef90_R6HYI8	Major tail protein putative	NA
UHGV-0149044_8	eggNOG-mapper	1209989.TepiRe1_1157	Phage tail tube protein, TTP	NA
UHGV-0149044_8	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0149044_9	Structural annotation	PF05657	NA	NA
UHGV-0149044_10	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0149044_10	UniRef90	UniRef90_R6IVT6	Bacteriophage protein PF04883 family	NA
UHGV-0149044_10	eggNOG-mapper	1280692.AUJL01000025_gene2076	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0149044_10	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0149044_10	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0149044_10	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0149044_11	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0149044_12	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0149044_12	UniRef90	UniRef90_R6I6I7	NA	NA
UHGV-0149044_13	PHROG	phrog_283	major head protein	head and packaging
UHGV-0149044_13	UniRef90	UniRef90_UPI001896DBE2	P22 coat protein	NA
UHGV-0149044_13	eggNOG-mapper	1297617.JPJD01000059_gene2633	P22 coat protein - gene protein 5	NA
UHGV-0149044_13	Pfam	PF11651	P22 coat protein - gene protein 5	P22_CoatProtein
UHGV-0149044_13	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0149044_14	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0149044_14	UniRef90	UniRef90_UPI001651708C	phage scaffolding protein	NA
UHGV-0149044_14	eggNOG-mapper	1196028.ALEF01000043_gene465	Phage minor structural protein GP20	NA
UHGV-0149044_14	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0149044_16	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0149044_16	UniRef90	UniRef90_A0A3D2QEP6	Phage_Mu_F domain-containing protein	NA
UHGV-0149044_16	eggNOG-mapper	1209989.TepiRe1_1146	Phage Mu protein F like protein	NA
UHGV-0149044_16	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0149044_16	Pfam	PF14424	The BURPS668_1122 family of deaminases	Toxin-deaminase
UHGV-0149044_16	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0149044_16	COG	COG2369	NA	NA
UHGV-0149044_17	PHROG	phrog_64	portal protein	head and packaging
UHGV-0149044_17	UniRef90	UniRef90_R6IBR5	Phage portal protein	NA
UHGV-0149044_17	eggNOG-mapper	97138.C820_00238	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0149044_17	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0149044_17	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0149044_18	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0149044_18	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0149044_18	UniRef90	UniRef90_R6I0M1	Phage terminase large subunit PBSX family	NA
UHGV-0149044_18	eggNOG-mapper	203119.Cthe_2474	Phage terminase, large subunit, PBSX family	NA
UHGV-0149044_18	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0149044_18	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0149044_18	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0149044_18	COG	COG1783	Phage terminase large subunit	NA
UHGV-0149044_18	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0149044_19	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0149044_19	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0149044_19	UniRef90	UniRef90_A0A374UNI2	Terminase small subunit	NA
UHGV-0149044_19	eggNOG-mapper	608534.GCWU000341_02298	Terminase small subunit	NA
UHGV-0149044_19	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0149044_19	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0149044_19	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0149044_21	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0149044_21	UniRef90	UniRef90_UPI001D05F87A	RNA polymerase subunit sigma-24	NA
UHGV-0149044_21	eggNOG-mapper	1235835.C814_01174	NA	NA
UHGV-0149044_21	Structural annotation	PF04545	NA	NA
UHGV-0149044_22	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0149044_22	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0149044_22	UniRef90	UniRef90_A0A2V2FWS9	DEAD/DEAH box helicase	NA
UHGV-0149044_22	eggNOG-mapper	1117108.PAALTS15_09950	SNF2 family N-terminal domain	NA
UHGV-0149044_22	PADLOC	DpdE_00010	DpdE	DPD
UHGV-0149044_22	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0149044_22	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0149044_22	Structural annotation	PF13872, PF16203, MF_01821, NF041790, COG0553	NA	NA
UHGV-0149044_23	PHROG	phrog_93	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0149044_23	UniRef90	UniRef90_A0A2V2FU35	VRR-NUC domain-containing protein	NA
UHGV-0149044_23	eggNOG-mapper	445335.CBN_2999	VRR-NUC domain-containing protein	NA
UHGV-0149044_23	Structural annotation	PF01870, MF_00130, NF002584, COG1591	NA	NA
UHGV-0149044_25	PHROG	phrog_256	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0149044_25	UniRef90	UniRef90_A0A2V2FYQ5	Virulence-associated protein E	NA
UHGV-0149044_25	eggNOG-mapper	1203606.HMPREF1526_00242	virulence-associated E family protein	NA
UHGV-0149044_25	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-0149044_25	COG	COG5545	Predicted P-loop ATPase and inactivated derivatives	NA
UHGV-0149044_25	Structural annotation	PF05272, MF_04000, NF005477, NF040562, COG5545	NA	NA
UHGV-0149044_26	KOfam	K02334	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	NA
UHGV-0149044_26	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0149044_26	UniRef90	UniRef90_A0A7X5INW3	POLAc domain-containing protein	NA
UHGV-0149044_26	eggNOG-mapper	1203606.HMPREF1526_00239	DNA polymerase	NA
UHGV-0149044_26	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0149044_26	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-0149044_26	Structural annotation	PF00476, MF_04101, NF011540, COG0749	NA	NA
UHGV-0149044_27	PHROG	phrog_112	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0149044_27	UniRef90	UniRef90_A0A2V2FV77	NA	NA
UHGV-0149044_27	eggNOG-mapper	1203606.HMPREF1526_00235	NA	NA
UHGV-0149044_27	Pfam	PF10991	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
UHGV-0149044_27	Structural annotation	PF10991, MF_04153, NF005241	NA	NA
UHGV-0149044_29	PHROG	phrog_69	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0149044_29	UniRef90	UniRef90_A0A2V2FS99	NA	NA
UHGV-0149044_29	eggNOG-mapper	1203606.HMPREF1526_00234	NA	NA
UHGV-0149044_29	Pfam	PF10926	NA	DUF2800
UHGV-0149044_29	COG	COG2887	RecB family exonuclease	NA
UHGV-0149044_29	Structural annotation	PF10926, MF_03030, TIGR00372, COG2887	NA	NA
UHGV-0149044_30	PHROG	phrog_22695	NA	unknown function
UHGV-0149044_30	eggNOG-mapper	1120971.AUCA01000043_gene1180	NA	NA
UHGV-0149044_32	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0149044_32	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0149044_32	UniRef90	UniRef90_R6HY73	HTH cro/C1-type domain-containing protein	NA
UHGV-0149044_32	eggNOG-mapper	330397.A8ATJ9_9CAUD	protein disulfide oxidoreductase activity	NA
UHGV-0149044_32	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0149044_32	Structural annotation	PF12844, MF_00535, NF041951, COG1476	NA	NA
UHGV-0149044_33	PHROG	phrog_3777	NA	unknown function
UHGV-0149044_33	UniRef90	UniRef90_UPI0019572B07	NA	NA
UHGV-0149044_33	eggNOG-mapper	767817.Desgi_3545	NA	NA
UHGV-0149044_33	Pfam	PF12957	NA	DUF3846
UHGV-0149044_33	COG	COG4734	Antirestriction protein ArdA	NA
UHGV-0149044_33	Structural annotation	PF12957	NA	NA
UHGV-0149044_36	KOfam	K01449	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0149044_36	PHROG	phrog_18750	NA	unknown function
UHGV-0149044_36	UniRef90	UniRef90_A0A3D5TM41	Hydrolase_2 domain-containing protein	NA
UHGV-0149044_36	eggNOG-mapper	445972.ANACOL_03333	Cell wall hydrolase	NA
UHGV-0149044_36	Pfam	PF07486	Cell Wall Hydrolase	Hydrolase_2
UHGV-0149044_36	COG	COG3773	Cell wall hydrolase CwlJ, involved in spore germination	NA
UHGV-0149044_36	Structural annotation	PF07486, TIGR02869, COG3773	NA	NA
UHGV-0149044_38	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0149044_38	UniRef90	UniRef90_UPI001A9A63C2	phage antirepressor KilAC domain-containing protein	NA
UHGV-0149044_38	eggNOG-mapper	1232449.BAHV02000010_gene2739	BRO family, N-terminal domain	NA
UHGV-0149044_38	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0149044_38	COG	COG3617	Prophage antirepressor	NA
UHGV-0149044_38	Structural annotation	PF03374, COG3645	NA	NA
UHGV-0149044_39	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0149044_39	PHROG	phrog_5817	anti-repressor Ant	transcription regulation
UHGV-0149044_39	UniRef90	UniRef90_UPI001C122BB1	antA/AntB antirepressor family protein	NA
UHGV-0149044_39	eggNOG-mapper	1232443.BAIA02000079_gene53	AntA/AntB antirepressor	NA
UHGV-0149044_39	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-0149044_39	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0149044_39	Structural annotation	PF08346, TIGR02681, COG3561	NA	NA
UHGV-0149044_41	UniRef90	UniRef90_A0A1C5ZMM8	HTH_8 domain-containing protein	NA
UHGV-0149044_41	eggNOG-mapper	1121335.Clst_0370	NA	NA
UHGV-0149044_41	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0149044_41	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-0149044_42	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0149044_42	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0149044_42	UniRef90	UniRef90_R5L1M5	DNA-binding helix-turn-helix / peptidase S24-like multi-domain protein	NA
UHGV-0149044_42	eggNOG-mapper	796940.HMPREF9628_00178	Peptidase S24-like	NA
UHGV-0149044_42	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0149044_42	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0149044_42	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0149044_42	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-0149044_43	PHROG	phrog_9151	HicB-like antitoxin	moron, auxiliary metabolic gene and host takeover
UHGV-0149044_43	UniRef90	UniRef90_A0A7C6HED8	Type II toxin-antitoxin system HicB family antitoxin	NA
UHGV-0149044_43	eggNOG-mapper	1392502.JNIO01000008_gene1606	protein encoded in hypervariable junctions of pilus gene clusters	NA
UHGV-0149044_43	Pfam	PF05534	HicB family	HicB
UHGV-0149044_43	COG	COG4226	Predicted nuclease of the RNAse H fold, HicB family	NA
UHGV-0149044_43	Structural annotation	PF21748, PF07878, NF041264, COG4226	NA	NA
UHGV-0149044_45	KOfam	K14059	int; integrase	NA
UHGV-0149044_45	PHROG	phrog_1	integrase	integration and excision
UHGV-0149044_45	UniRef90	UniRef90_UPI0005AA7FA8	site-specific integrase	NA
UHGV-0149044_45	eggNOG-mapper	1378168.N510_03298	Belongs to the 'phage' integrase family	NA
UHGV-0149044_45	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0149044_45	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0149044_45	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0149044_47	PHROG	phrog_608	holin	lysis
UHGV-0149044_47	UniRef90	UniRef90_R6I9L8	Putative phage holin	NA
UHGV-0149044_47	eggNOG-mapper	1121472.AQWN01000009_gene420	Bacteriophage holin of superfamily 6 (Holin_LLH)	NA
UHGV-0149044_47	Pfam	PF09682	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
UHGV-0149044_48	PHROG	phrog_7698	endolysin	lysis
UHGV-0149044_48	UniRef90	UniRef90_R6IVV6	Possible cell wall-binding protein	NA
UHGV-0149044_48	eggNOG-mapper	525254.HMPREF0072_1273	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0149044_48	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0149044_48	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0149044_48	Structural annotation	PF01476, TIGR02899, COG1388	NA	NA
UHGV-0149044_49	PHROG	phrog_1863	NA	unknown function
UHGV-0149044_49	eggNOG-mapper	1235797.C816_02840	NA	NA
UHGV-0149044_50	PHROG	phrog_27545	NA	unknown function
UHGV-0149044_50	UniRef90	UniRef90_A0A2V2GQB6	Chitin-binding type-3 domain-containing protein	NA
UHGV-0149044_50	eggNOG-mapper	411471.SUBVAR_06976	NA	NA
UHGV-0149044_50	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12