UHGV-0149308

Genome information

vOTU vOTU-021936

Genome length 30,317 bps

CDS count 55

Completeness 66.20% (medium-quality)

geNomad score 0.9797

Prediction confidence Confident

Genome information
Genome ID	UHGV-0149308
vOTU ID	vOTU-021936
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_411736
BioSample	SAMN05414911
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	66.20% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9797
Virus hallmark genes (geNomad)	0
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	7.5
Jumbo phage	No

Genome content
Genome length	30,317 bps
GC content	50.33%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	55
CDS density	85.27%
Average CDS length	471.33 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0149308_2	PHROG	phrog_14295	NA	unknown function
UHGV-0149308_2	UniRef90	UniRef90_UPI0002F52239	phage tail tape measure protein	NA
UHGV-0149308_2	eggNOG-mapper	679935.Alfi_0461	NA	NA
UHGV-0149308_2	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0149308_3	PHROG	phrog_21217	NA	unknown function
UHGV-0149308_6	Pfam	PF13385	Concanavalin A-like lectin/glucanases superfamily	Laminin_G_3
UHGV-0149308_6	Structural annotation	PF00354	NA	NA
UHGV-0149308_8	Structural annotation	PF10043, NF008028	NA	NA
UHGV-0149308_9	PHROG	phrog_32423	NA	unknown function
UHGV-0149308_11	PHROG	phrog_873	endolysin	head and packaging
UHGV-0149308_11	UniRef90	UniRef90_UPI0018ABA41D	structural protein P5	NA
UHGV-0149308_11	eggNOG-mapper	411477.PARMER_01682	NA	NA
UHGV-0149308_12	Pfam	PF20647	NA	DUF6808
UHGV-0149308_12	Structural annotation	PF20647	NA	NA
UHGV-0149308_13	eggNOG-mapper	445970.ALIPUT_01633	Bacterial dnaA protein helix-turn-helix	NA
UHGV-0149308_13	Structural annotation	PF08299, NF004688	NA	NA
UHGV-0149308_18	Structural annotation	PF10628	NA	NA
UHGV-0149308_21	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0149308_21	PHROG	phrog_1	integrase	integration and excision
UHGV-0149308_21	UniRef90	UniRef90_R7JKN8	Site-specific recombinase XerD	NA
UHGV-0149308_21	eggNOG-mapper	679935.Alfi_0474	Arm DNA-binding domain	NA
UHGV-0149308_21	Pfam	PF17293	Arm DNA-binding domain	Arm-DNA-bind_5
UHGV-0149308_21	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0149308_21	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0149308_21	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0149308_21	Structural annotation	PF17293, PF13102, PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0149308_22	UniRef90	UniRef90_UPI000B5C1847	helix-turn-helix domain-containing protein	NA
UHGV-0149308_22	eggNOG-mapper	483216.BACEGG_03179	NA	NA
UHGV-0149308_26	KOfam	K18815	aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]	NA
UHGV-0149308_26	Pfam	PF13508	Acetyltransferase (GNAT) domain	Acetyltransf_7
UHGV-0149308_26	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-0149308_31	PHROG	phrog_874	NA	unknown function
UHGV-0149308_31	eggNOG-mapper	762968.HMPREF9441_00541	NA	NA
UHGV-0149308_31	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0149308_33	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0149308_33	PHROG	phrog_363	DNA methyltransferase	other
UHGV-0149308_33	UniRef90	UniRef90_A0A374A0C9	Cytosine-specific methyltransferase	NA
UHGV-0149308_33	eggNOG-mapper	445970.ALIPUT_01612	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0149308_33	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0149308_33	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0149308_33	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0149308_33	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0149308_33	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0149308_34	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0149308_34	PHROG	phrog_23224	DNA methyltransferase	other
UHGV-0149308_34	UniRef90	UniRef90_UPI001B39CDDA	site-specific DNA-methyltransferase	NA
UHGV-0149308_34	eggNOG-mapper	1123304.AQYA01000037_gene207	DNA methylase	NA
UHGV-0149308_34	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-0149308_34	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0149308_34	COG	COG0863	DNA modification methylase	NA
UHGV-0149308_34	Structural annotation	PF01555, NF010253, COG0863	NA	NA
UHGV-0149308_35	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-0149308_35	PHROG	phrog_9562	NA	unknown function
UHGV-0149308_35	UniRef90	UniRef90_A0A5B5VMT7	Pentapeptide repeat-containing protein	NA
UHGV-0149308_35	eggNOG-mapper	1226322.HMPREF1545_00011	Pentapeptide repeats (8 copies)	NA
UHGV-0149308_35	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-0149308_35	Pfam	PF19062	NA	DUF5758
UHGV-0149308_35	COG	COG1357	NA	NA
UHGV-0149308_35	Structural annotation	PF19062, PF13599, NF000139	NA	NA
UHGV-0149308_36	PHROG	phrog_824	NA	unknown function
UHGV-0149308_36	UniRef90	UniRef90_A0A373ZU69	VRR-NUC domain-containing protein	NA
UHGV-0149308_36	eggNOG-mapper	357276.EL88_12700	VRR_NUC	NA
UHGV-0149308_36	Structural annotation	PF08774	NA	NA
UHGV-0149308_38	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0149308_38	eggNOG-mapper	1122991.BAIZ01000025_gene1850	NA	NA
UHGV-0149308_38	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0149308_39	eggNOG-mapper	1121100.JCM6294_521	NA	NA
UHGV-0149308_41	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0149308_41	UniRef90	UniRef90_UPI001CF85C41	ERF family protein	NA
UHGV-0149308_41	eggNOG-mapper	762982.HMPREF9442_00551	Erf family	NA
UHGV-0149308_41	Pfam	PF04404	ERF superfamily	ERF
UHGV-0149308_41	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0149308_47	PHROG	phrog_1035	endonuclease VII	DNA, RNA and nucleotide metabolism
UHGV-0149308_47	Structural annotation	PF18275	NA	NA
UHGV-0149308_48	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0149308_48	UniRef90	UniRef90_UPI00164C574E	DNA adenine methylase	NA
UHGV-0149308_48	eggNOG-mapper	1236504.HMPREF2132_01695	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0149308_48	PADLOC	MTase_II_00075	Type II methyltransferase	RM
UHGV-0149308_48	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0149308_48	Structural annotation	TIGR00571, COG0338	NA	NA
UHGV-0149308_51	PHROG	phrog_4973	NA	unknown function
UHGV-0149308_51	Pfam	PF14090	Helix-turn-helix domain	HTH_39
UHGV-0149308_51	Structural annotation	PF14090, NF040939, COG4738	NA	NA
UHGV-0149308_53	KOfam	K07684	narL; two-component system, NarL family, nitrate/nitrite response regulator NarL	NA
UHGV-0149308_53	UniRef90	UniRef90_A0A5B5VJJ0	Helix-turn-helix transcriptional regulator	NA
UHGV-0149308_53	eggNOG-mapper	1116472.MGMO_177c00100	helix_turn_helix, Lux Regulon	NA
UHGV-0149308_53	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-0149308_53	COG	COG2197	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	NA
UHGV-0149308_53	Structural annotation	PF00196, MF_00674, COG2771	NA	NA