UHGV-0150900

Genome information

Genome length 15,843 bps

CDS count 19

Completeness 81.46% (medium-quality)

geNomad score 0.9623

Prediction confidence Confident

Genome information
Genome ID	UHGV-0150900
vOTU ID	vOTU-036059
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_399462
BioSample	NA
Country	United States
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	81.46% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	6
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9623
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.88
Jumbo phage	No

Genome content
Genome length	15,843 bps
GC content	41.42%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	19
CDS density	90.87%
Average CDS length	759.95 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0150900_1	PHROG	phrog_2150	terminase	head and packaging
UHGV-0150900_1	UniRef90	UniRef90_A0A843GSD8	Phage DNA encapsidation protein	NA
UHGV-0150900_1	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0150900_1	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0150900_3	eggNOG-mapper	211110.gbs1133	CHAP domain protein	NA
UHGV-0150900_3	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-0150900_3	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0150900_3	COG	COG3942	Surface antigen	NA
UHGV-0150900_3	Structural annotation	PF18013	NA	NA
UHGV-0150900_5	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0150900_5	UniRef90	UniRef90_A0A843HGC7	Ig-like domain-containing protein	NA
UHGV-0150900_5	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-0150900_5	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-0150900_8	PHROG	phrog_2248	tail protein	tail
UHGV-0150900_8	UniRef90	UniRef90_A0A843GL83	Caud_tail_N domain-containing protein	NA
UHGV-0150900_8	eggNOG-mapper	12345.Q9FZW6_BPGA1	NA	NA
UHGV-0150900_8	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-0150900_8	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-0150900_8	Structural annotation	PF20934, PF16838	NA	NA
UHGV-0150900_9	PHROG	phrog_2038	upper collar connector	connector
UHGV-0150900_9	UniRef90	UniRef90_P04332	Portal protein	NA
UHGV-0150900_9	eggNOG-mapper	10753.B7SSN1_BPNF	Phage Connector (GP10)	NA
UHGV-0150900_9	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0150900_9	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-0150900_10	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-0150900_10	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-0150900_11	Structural annotation	PF12708, TIGR04247, COG3420	NA	NA
UHGV-0150900_15	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0150900_15	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0150900_15	UniRef90	UniRef90_A0A843GSA4	DNA-directed DNA polymerase	NA
UHGV-0150900_15	eggNOG-mapper	12345.Q96206_BPGA1	nucleotide binding	NA
UHGV-0150900_15	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0150900_15	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-0150900_17	Structural annotation	PF10991, MF_04153, NF004512, COG0629	NA	NA
UHGV-0150900_19	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0150900_19	PHROG	phrog_7698	endolysin	lysis
UHGV-0150900_19	UniRef90	UniRef90_A0A396PUP5	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0150900_19	eggNOG-mapper	478749.BRYFOR_08515	Cpl-7 lysozyme C-terminal domain protein	NA
UHGV-0150900_19	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0150900_19	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0150900_19	Structural annotation	PF01510, MF_04111, NF008758, COG3023	NA	NA