UHGV-0151100

Genome information

vOTU vOTU-022000

Genome length 15,218 bps

CDS count 23

Completeness 79.64% (medium-quality)

geNomad score 0.9804

Prediction confidence Confident

Genome information
Genome ID	UHGV-0151100
vOTU ID	vOTU-022000
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_405034
BioSample	NA
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	79.64% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9804
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.21
Jumbo phage	No

Genome content
Genome length	15,218 bps
GC content	43.93%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	23
CDS density	88.54%
Average CDS length	586.30 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0151100_2	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-0151100_2	UniRef90	UniRef90_P68930	Proximal tail tube connector protein	NA
UHGV-0151100_2	eggNOG-mapper	10756.TUB11_BPPH2	NA	NA
UHGV-0151100_3	PHROG	phrog_2038	upper collar connector	connector
UHGV-0151100_3	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-0151100_3	eggNOG-mapper	10753.B7SSN1_BPNF	Phage Connector (GP10)	NA
UHGV-0151100_3	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0151100_3	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-0151100_4	PHROG	phrog_2248	tail protein	tail
UHGV-0151100_4	UniRef90	UniRef90_A0A843HN65	Caud_tail_N domain-containing protein	NA
UHGV-0151100_4	eggNOG-mapper	1309583.M4W9Q4_9CAUD	NA	NA
UHGV-0151100_4	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-0151100_4	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-0151100_4	Structural annotation	PF20934, PF16838	NA	NA
UHGV-0151100_5	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0151100_5	UniRef90	UniRef90_A0A843HGC7	Ig-like domain-containing protein	NA
UHGV-0151100_5	eggNOG-mapper	10756.CAPSD_BPPH2	viral capsid	NA
UHGV-0151100_5	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-0151100_7	PHROG	phrog_11037	NA	unknown function
UHGV-0151100_7	UniRef90	UniRef90_A0A843HVW4	Phage_lysozyme2 domain-containing protein	NA
UHGV-0151100_7	eggNOG-mapper	226185.EF_2093	Bacteriophage peptidoglycan hydrolase	NA
UHGV-0151100_7	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0151100_7	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0151100_7	Structural annotation	PF18013	NA	NA
UHGV-0151100_8	PHROG	phrog_7698	endolysin	lysis
UHGV-0151100_8	UniRef90	UniRef90_A0A396P823	Cpl-7 domain-containing protein	NA
UHGV-0151100_8	eggNOG-mapper	525255.HMPREF0077_0007	hydrolase family 25	NA
UHGV-0151100_8	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0151100_8	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0151100_10	PHROG	phrog_2150	terminase	head and packaging
UHGV-0151100_10	UniRef90	UniRef90_A0A843HJH1	Phage DNA encapsidation protein	NA
UHGV-0151100_10	eggNOG-mapper	1162304.I3PV13_9CAUD	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0151100_10	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0151100_10	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0151100_11	KOfam	K03698	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	NA
UHGV-0151100_11	PHROG	phrog_28876	metal-dependent phosphohydrolase	other
UHGV-0151100_11	UniRef90	UniRef90_UPI00189C14D9	hydrolase	NA
UHGV-0151100_11	eggNOG-mapper	1410658.JHWI01000002_gene118	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-0151100_11	Pfam	PF01966	HD domain	HD
UHGV-0151100_11	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-0151100_11	Structural annotation	PF07514, MF_01427, NF010007, COG3481	NA	NA
UHGV-0151100_12	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0151100_12	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0151100_12	UniRef90	UniRef90_A0A077ZQ14	DNA-directed DNA polymerase	NA
UHGV-0151100_12	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-0151100_12	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0151100_12	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-0151100_14	Pfam	PF17427	Phage Single-stranded DNA-binding protein	Phi29_Phage_SSB
UHGV-0151100_14	Structural annotation	PF17427	NA	NA
UHGV-0151100_15	Structural annotation	PF17548	NA	NA