UHGV-0151796

Genome information

Genome length 36,642 bps

CDS count 62

Completeness 83.56% (medium-quality)

geNomad score 0.9794

Prediction confidence Confident

Genome information
Genome ID	UHGV-0151796
vOTU ID	vOTU-027497
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_457555
BioSample	NA
Country	United States
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	83.56% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	26
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9794
Virus hallmark genes (geNomad)	16
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	54.91
Jumbo phage	No

Genome content
Genome length	36,642 bps
GC content	46.62%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	62
CDS density	92.08%
Average CDS length	551.52 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0151796_1	UniRef90	UniRef90_A0A4S2AEA3	NA	NA
UHGV-0151796_1	eggNOG-mapper	657322.FPR_11180	NA	NA
UHGV-0151796_1	Pfam	PF13711	NA	DUF4160
UHGV-0151796_2	eggNOG-mapper	657322.FPR_11170	NA	NA
UHGV-0151796_3	PHROG	phrog_16228	NA	unknown function
UHGV-0151796_3	UniRef90	UniRef90_A0A3D5L8P8	Uma2 domain-containing protein	NA
UHGV-0151796_3	eggNOG-mapper	478749.BRYFOR_07230	Putative restriction endonuclease	NA
UHGV-0151796_3	Pfam	PF05685	Putative restriction endonuclease	Uma2
UHGV-0151796_3	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-0151796_3	Structural annotation	PF05685, COG4636	NA	NA
UHGV-0151796_4	PHROG	phrog_38135	NA	unknown function
UHGV-0151796_4	UniRef90	UniRef90_A0A416C0H6	NA	NA
UHGV-0151796_4	eggNOG-mapper	742723.HMPREF9477_00941	dextransucrase activity	NA
UHGV-0151796_4	Pfam	PF14020	NA	DUF4236
UHGV-0151796_4	COG	COG3118	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	NA
UHGV-0151796_5	PHROG	phrog_87	metallo-protease	other
UHGV-0151796_5	UniRef90	UniRef90_A0A1C5LRF7	Metallopeptidase immA	NA
UHGV-0151796_5	eggNOG-mapper	411460.RUMTOR_02055	IrrE N-terminal-like domain	NA
UHGV-0151796_5	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0151796_5	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0151796_5	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0151796_6	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0151796_6	UniRef90	UniRef90_A0A1C5LRW3	Helix-turn-helix domain	NA
UHGV-0151796_6	eggNOG-mapper	411460.RUMTOR_02056	Bacteriophage CI repressor helix-turn-helix domain	NA
UHGV-0151796_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0151796_6	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-0151796_6	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-0151796_7	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0151796_7	UniRef90	UniRef90_A0A1C5LRT3	HTH-type transcriptional regulator immR	NA
UHGV-0151796_7	eggNOG-mapper	411490.ANACAC_00814	Helix-turn-helix XRE-family like proteins	NA
UHGV-0151796_7	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0151796_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0151796_7	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0151796_7	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0151796_9	PHROG	phrog_585	NA	unknown function
UHGV-0151796_9	UniRef90	UniRef90_UPI00082A7FCF	NA	NA
UHGV-0151796_9	eggNOG-mapper	663952.SDD27957_07440	NA	NA
UHGV-0151796_9	Pfam	PF10711	NA	DUF2513
UHGV-0151796_9	Structural annotation	PF10711, TIGR03433, COG1695	NA	NA
UHGV-0151796_13	Structural annotation	PF13835, COG5045	NA	NA
UHGV-0151796_14	Structural annotation	PF13560, MF_00535, NF041951, COG3655	NA	NA
UHGV-0151796_17	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0151796_17	UniRef90	UniRef90_A0A373CTR1	Recombinase	NA
UHGV-0151796_17	eggNOG-mapper	742740.HMPREF9474_03486	YqaJ viral recombinase family	NA
UHGV-0151796_17	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0151796_17	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0151796_17	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0151796_17	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0151796_18	PHROG	phrog_674	NA	unknown function
UHGV-0151796_18	UniRef90	UniRef90_A0A3R6JSD0	NA	NA
UHGV-0151796_18	eggNOG-mapper	742740.HMPREF9474_03487	NA	NA
UHGV-0151796_18	Pfam	PF07083	NA	DUF1351
UHGV-0151796_18	Structural annotation	PF07083	NA	NA
UHGV-0151796_19	PHROG	phrog_2760	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0151796_19	UniRef90	UniRef90_A0A3R6NUD5	Phage recombination protein Bet	NA
UHGV-0151796_19	eggNOG-mapper	536233.CLO_0507	Phage recombination protein Bet	NA
UHGV-0151796_19	Pfam	PF03837	RecT family	RecT
UHGV-0151796_19	NCBIFam	TIGR01913.1	phage recombination protein Bet	NA
UHGV-0151796_19	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0151796_19	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0151796_21	PHROG	phrog_1029	NA	unknown function
UHGV-0151796_21	UniRef90	UniRef90_E7GRE5	NA	NA
UHGV-0151796_21	eggNOG-mapper	742740.HMPREF9474_03490	NA	NA
UHGV-0151796_21	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0151796_22	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0151796_22	eggNOG-mapper	742740.HMPREF9474_03491	NA	NA
UHGV-0151796_22	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0151796_23	PHROG	phrog_19658	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0151796_23	UniRef90	UniRef90_UPI001D090F0C	conserved phage C-terminal domain-containing protein	NA
UHGV-0151796_23	eggNOG-mapper	742740.HMPREF9474_03492	DnaD domain protein	NA
UHGV-0151796_23	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0151796_23	Structural annotation	PF03444, MF_01911, TIGR01610, COG5529	NA	NA
UHGV-0151796_24	PHROG	phrog_15077	NA	unknown function
UHGV-0151796_24	UniRef90	UniRef90_A0A1M6RQ18	RNA polymerase, alpha chain C terminal domain	NA
UHGV-0151796_24	eggNOG-mapper	742740.HMPREF9474_03494	NA	NA
UHGV-0151796_24	Structural annotation	NF038070	NA	NA
UHGV-0151796_25	Structural annotation	PF04936	NA	NA
UHGV-0151796_28	UniRef90	UniRef90_A0A373CTS1	NA	NA
UHGV-0151796_28	eggNOG-mapper	1235799.C818_04211	NA	NA
UHGV-0151796_28	Pfam	PF04448	NA	DUF551
UHGV-0151796_29	PHROG	phrog_6568	NA	unknown function
UHGV-0151796_29	eggNOG-mapper	428125.CLOLEP_01394	NA	NA
UHGV-0151796_30	PHROG	phrog_16126	NA	unknown function
UHGV-0151796_32	PHROG	phrog_11237	NA	unknown function
UHGV-0151796_32	eggNOG-mapper	610130.Closa_0738	NA	NA
UHGV-0151796_33	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0151796_33	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0151796_33	UniRef90	UniRef90_A0A416C0F0	Helix-turn-helix domain-containing protein	NA
UHGV-0151796_33	eggNOG-mapper	397291.C804_01124	sequence-specific DNA binding	NA
UHGV-0151796_33	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0151796_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0151796_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0151796_33	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0151796_34	UniRef90	UniRef90_A0A7X5DAV1	Toxin-antitoxin system HicB family antitoxin	NA
UHGV-0151796_34	Structural annotation	PF07878, NF010256, COG4691	NA	NA
UHGV-0151796_35	PHROG	phrog_2011	anti-repressor Ant	transcription regulation
UHGV-0151796_35	UniRef90	UniRef90_A0A373CYS5	Bro-N domain-containing protein	NA
UHGV-0151796_35	eggNOG-mapper	642492.Clole_2799	Prophage antirepressor	NA
UHGV-0151796_35	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0151796_35	COG	COG3617	Prophage antirepressor	NA
UHGV-0151796_35	Structural annotation	PF09669, TIGR02681, COG3646	NA	NA
UHGV-0151796_38	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-0151796_38	UniRef90	UniRef90_A0A3D5L8R6	Terminase	NA
UHGV-0151796_38	eggNOG-mapper	33035.JPJF01000107_gene435	NA	NA
UHGV-0151796_38	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0151796_38	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0151796_38	COG	COG5484	NA	NA
UHGV-0151796_38	Structural annotation	PF06056, NF040601, COG5484	NA	NA
UHGV-0151796_39	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0151796_39	PHROG	phrog_10250	NA	unknown function
UHGV-0151796_39	UniRef90	UniRef90_A0A3D5L980	PBSX family phage terminase large subunit	NA
UHGV-0151796_39	eggNOG-mapper	642492.Clole_2765	Phage terminase, large subunit, PBSX family	NA
UHGV-0151796_39	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0151796_39	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0151796_39	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0151796_39	COG	COG1783	Phage terminase large subunit	NA
UHGV-0151796_39	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0151796_40	PHROG	phrog_64	portal protein	head and packaging
UHGV-0151796_40	UniRef90	UniRef90_A0A3D5L896	Phage portal protein	NA
UHGV-0151796_40	eggNOG-mapper	610130.Closa_1391	Phage portal protein, SPP1 family	NA
UHGV-0151796_40	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0151796_40	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0151796_40	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0151796_41	KOfam	K11044	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	NA
UHGV-0151796_41	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0151796_41	UniRef90	UniRef90_UPI001C01BE4F	minor capsid protein	NA
UHGV-0151796_41	eggNOG-mapper	203119.Cthe_2476	Phage Mu protein F like protein	NA
UHGV-0151796_41	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0151796_41	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-0151796_41	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0151796_41	COG	COG2369	NA	NA
UHGV-0151796_41	Structural annotation	PF03496, PF04233, MF_04139, NF040688, TIGR01641, COG2369	NA	NA
UHGV-0151796_45	Structural annotation	PF11305, MF_01360	NA	NA
UHGV-0151796_46	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0151796_46	UniRef90	UniRef90_UPI001F31D767	phage scaffolding protein	NA
UHGV-0151796_46	eggNOG-mapper	1567014.A0A0A7S0J5_9VIRU	Phage minor structural protein GP20	NA
UHGV-0151796_46	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0151796_46	Structural annotation	PF06810	NA	NA
UHGV-0151796_47	PHROG	phrog_247	major head protein	head and packaging
UHGV-0151796_47	UniRef90	UniRef90_A0A3R6WDT3	Coat protein	NA
UHGV-0151796_47	eggNOG-mapper	357809.Cphy_2964	NA	NA
UHGV-0151796_47	Structural annotation	PF20036, MF_04113, TIGR04387, COG4834	NA	NA
UHGV-0151796_48	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0151796_48	UniRef90	UniRef90_A0A1E3A379	Phage gp6-like head-tail connector protein	NA
UHGV-0151796_48	eggNOG-mapper	610130.Closa_1396	NA	NA
UHGV-0151796_48	Structural annotation	PF05135	NA	NA
UHGV-0151796_49	PHROG	phrog_615	head-tail adaptor	connector
UHGV-0151796_49	eggNOG-mapper	1121335.Clst_0394	NA	NA
UHGV-0151796_49	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-0151796_50	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0151796_50	UniRef90	UniRef90_A0A417UGR4	HK97 gp10 family phage protein	NA
UHGV-0151796_50	eggNOG-mapper	203119.Cthe_2482	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0151796_50	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0151796_50	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0151796_51	PHROG	phrog_525	NA	unknown function
UHGV-0151796_51	eggNOG-mapper	203119.Cthe_2483	NA	NA
UHGV-0151796_51	Pfam	PF20765	NA	DUF6838
UHGV-0151796_51	Structural annotation	PF20765	NA	NA
UHGV-0151796_52	PHROG	phrog_279	tail sheath	tail
UHGV-0151796_52	UniRef90	UniRef90_A0A3D5L8B0	Phage tail sheath protein	NA
UHGV-0151796_52	eggNOG-mapper	610130.Closa_1400	Phage tail sheath C-terminal domain	NA
UHGV-0151796_52	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0151796_52	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0151796_52	Structural annotation	PF04984, PF17482, COG4386	NA	NA
UHGV-0151796_53	PHROG	phrog_365	tail protein	tail
UHGV-0151796_53	UniRef90	UniRef90_A0A417U0W1	Phage portal protein	NA
UHGV-0151796_53	eggNOG-mapper	1121335.Clst_0398	Phage tail tube protein	NA
UHGV-0151796_53	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0151796_53	Structural annotation	PF09393, TIGR02241, COG5437	NA	NA
UHGV-0151796_54	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0151796_54	UniRef90	UniRef90_A0A3D5L8L7	Phage portal protein	NA
UHGV-0151796_54	eggNOG-mapper	1121335.Clst_0400	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-0151796_54	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0151796_54	Structural annotation	PF08890, COG4518	NA	NA
UHGV-0151796_55	PHROG	phrog_1068	tail length tape measure protein	tail
UHGV-0151796_55	UniRef90	UniRef90_UPI001C009D6E	tape measure protein	NA
UHGV-0151796_55	eggNOG-mapper	552396.HMPREF0863_00318	tape measure	NA
UHGV-0151796_55	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0151796_55	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0151796_55	COG	COG5281	Phage-related minor tail protein	NA
UHGV-0151796_56	KOfam	K22409	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0151796_56	PHROG	phrog_380	endolysin	lysis
UHGV-0151796_56	UniRef90	UniRef90_A0A3D5L8C3	Peptidoglycan-binding protein	NA
UHGV-0151796_56	eggNOG-mapper	610130.Closa_1405	LysM domain	NA
UHGV-0151796_56	Pfam	PF01476	LysM domain	LysM
UHGV-0151796_56	COG	COG1388	LysM repeat	NA
UHGV-0151796_56	Structural annotation	PF21821, MF_02014, TIGR02126, NF010723, COG3499	NA	NA
UHGV-0151796_57	PHROG	phrog_400	tail protein	tail
UHGV-0151796_57	UniRef90	UniRef90_A0A174R8Z2	NA	NA
UHGV-0151796_57	eggNOG-mapper	610130.Closa_1406	PFAM Phage late control gene D protein (GPD)	NA
UHGV-0151796_57	COG	COG4193	Beta- N-acetylglucosaminidase	NA
UHGV-0151796_57	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0151796_58	UniRef90	UniRef90_A0A3D5L8R0	DNA helicase	NA
UHGV-0151796_58	eggNOG-mapper	610130.Closa_1407	NA	NA
UHGV-0151796_59	PHROG	phrog_120	baseplate protein	tail
UHGV-0151796_59	UniRef90	UniRef90_A0A3D5LAN0	NA	NA
UHGV-0151796_59	eggNOG-mapper	610130.Closa_1408	NA	NA
UHGV-0151796_59	Pfam	PF10934	NA	DUF2634
UHGV-0151796_59	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0151796_59	Structural annotation	PF10934, TIGR03357, COG3628	NA	NA
UHGV-0151796_60	PHROG	phrog_6	baseplate protein	tail
UHGV-0151796_60	UniRef90	UniRef90_A0A3D5L8T7	Baseplate J protein	NA
UHGV-0151796_60	eggNOG-mapper	610130.Closa_1409	Baseplate J-like protein	NA
UHGV-0151796_60	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0151796_60	COG	COG3299	NA	NA
UHGV-0151796_60	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0151796_61	PHROG	phrog_521	tail protein	tail
UHGV-0151796_61	UniRef90	UniRef90_A0A174R4L0	Phage-like element pbsx protein xkdT	NA
UHGV-0151796_61	eggNOG-mapper	610130.Closa_1410	NA	NA
UHGV-0151796_61	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0151796_61	COG	COG3778	NA	NA
UHGV-0151796_61	Structural annotation	PF10076, TIGR01634, COG3778	NA	NA
UHGV-0151796_62	PHROG	phrog_30004	NA	unknown function
UHGV-0151796_62	eggNOG-mapper	411902.CLOBOL_05647	nuclear chromosome segregation	NA
UHGV-0151796_62	COG	COG5301	Phage-related tail fiber protein	NA