UHGV-0152755

Genome information

vOTU vOTU-022037

Genome length 32,333 bps

CDS count 44

Completeness 84.97% (medium-quality)

geNomad score 0.9827

Prediction confidence Confident

Genome information
Genome ID	UHGV-0152755
vOTU ID	vOTU-022037
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_470061
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.97% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	35
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9827
Virus hallmark genes (geNomad)	13
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	80.34
Jumbo phage	No

Genome content
Genome length	32,333 bps
GC content	42.67%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	44
CDS density	93.69%
Average CDS length	691.57 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0152755_1	UniRef90	UniRef90_A0A8B4HXZ0	Prophage pi2 protein 05	NA
UHGV-0152755_1	eggNOG-mapper	646413.C5IUM3_9CAUD	NA	NA
UHGV-0152755_1	Pfam	PF05339	NA	DUF739
UHGV-0152755_2	PHROG	phrog_3773	NA	unknown function
UHGV-0152755_2	Structural annotation	PF01423, MF_00257, NF041667	NA	NA
UHGV-0152755_3	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0152755_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0152755_3	UniRef90	UniRef90_UPI001583833E	helix-turn-helix transcriptional regulator	NA
UHGV-0152755_3	eggNOG-mapper	585203.SMSK564_1314	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0152755_3	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0152755_3	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0152755_4	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0152755_4	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0152755_4	UniRef90	UniRef90_Q38585	Anti-repressor protein	NA
UHGV-0152755_4	eggNOG-mapper	64186.Q38585_9CAUD	DNA binding	NA
UHGV-0152755_4	Pfam	PF08346	AntA/AntB antirepressor	AntA
UHGV-0152755_4	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0152755_4	Structural annotation	PF03374, PF08346, TIGR02681, COG3645, COG3561	NA	NA
UHGV-0152755_5	PHROG	phrog_904	excisionase	integration and excision
UHGV-0152755_5	UniRef90	UniRef90_A0A0E2Q2P3	Excisionase	NA
UHGV-0152755_5	eggNOG-mapper	1069533.Sinf_0769	NA	NA
UHGV-0152755_5	Structural annotation	PF20063	NA	NA
UHGV-0152755_6	PHROG	phrog_1456	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0152755_6	UniRef90	UniRef90_A0A2H4J7C7	HTH marR-type domain-containing protein	NA
UHGV-0152755_6	eggNOG-mapper	997830.HMPREF1124_0572	NA	NA
UHGV-0152755_6	Pfam	PF08279	HTH domain	HTH_11
UHGV-0152755_6	Structural annotation	PF02002, MF_01909, NF040582, COG5625	NA	NA
UHGV-0152755_8	UniRef90	UniRef90_A0A2C5WHY9	GRAM_POS_ANCHORING domain-containing protein	NA
UHGV-0152755_8	eggNOG-mapper	435842.HMPREF0848_00198	Pilin isopeptide linkage domain protein	NA
UHGV-0152755_8	Pfam	PF17961	Bacterial Ig domain	Big_8
UHGV-0152755_8	Pfam	PF05737	Collagen binding domain	Collagen_bind
UHGV-0152755_8	COG	COG4932	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	NA
UHGV-0152755_8	Structural annotation	PF05737, PF17961, NF000535	NA	NA
UHGV-0152755_9	PHROG	phrog_2486	NA	unknown function
UHGV-0152755_10	PHROG	phrog_2553	NA	unknown function
UHGV-0152755_10	UniRef90	UniRef90_UPI00118251C3	2-hydroxyacyl-CoA dehydratase	NA
UHGV-0152755_11	PHROG	phrog_25348	NA	unknown function
UHGV-0152755_11	UniRef90	UniRef90_A0A2C5WGU6	Single-stranded DNA-binding protein	NA
UHGV-0152755_11	eggNOG-mapper	1277892.M1IEW6_9CAUD	ERF superfamily	NA
UHGV-0152755_11	Pfam	PF04404	ERF superfamily	ERF
UHGV-0152755_11	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0152755_12	PHROG	phrog_674	NA	unknown function
UHGV-0152755_12	UniRef90	UniRef90_A0A1V0H7T8	NA	NA
UHGV-0152755_12	eggNOG-mapper	1239381.K4JU67_9CAUD	NA	NA
UHGV-0152755_12	Pfam	PF07083	NA	DUF1351
UHGV-0152755_12	Structural annotation	PF07083	NA	NA
UHGV-0152755_13	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0152755_13	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0152755_13	UniRef90	UniRef90_A0A6A8UB55	Single-stranded DNA-binding protein	NA
UHGV-0152755_13	eggNOG-mapper	264199.stu1753	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0152755_13	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0152755_13	NCBIFam	NF005580.0	single-stranded DNA-binding protein	NA
UHGV-0152755_13	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0152755_13	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0152755_13	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0152755_14	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0152755_14	UniRef90	UniRef90_UPI00189C4851	HNH endonuclease	NA
UHGV-0152755_14	eggNOG-mapper	945021.TEH_18310	NUMOD4 motif	NA
UHGV-0152755_14	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0152755_14	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0152755_14	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0152755_14	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-0152755_15	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0152755_15	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0152755_15	UniRef90	UniRef90_UPI0012BD12A4	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0152755_15	eggNOG-mapper	112023.Q9MCM0_9CAUD	magnesium ion binding	NA
UHGV-0152755_15	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0152755_15	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0152755_16	PHROG	phrog_1982	NA	unknown function
UHGV-0152755_16	Structural annotation	PF01381, NF040507, COG2944	NA	NA
UHGV-0152755_17	Structural annotation	PF10750, MF_01054, NF001220, COG5515	NA	NA
UHGV-0152755_18	PHROG	phrog_1489	NA	unknown function
UHGV-0152755_18	UniRef90	UniRef90_O34049	ORF18	NA
UHGV-0152755_18	Structural annotation	PF13773	NA	NA
UHGV-0152755_19	PHROG	phrog_13248	NA	unknown function
UHGV-0152755_19	UniRef90	UniRef90_A0A412PL26	Sporulation protein Cse60	NA
UHGV-0152755_19	Pfam	PF10957	Sporulation protein Cse60	Spore_Cse60
UHGV-0152755_19	Structural annotation	PF10957, NF041095	NA	NA
UHGV-0152755_20	PHROG	phrog_121	NA	unknown function
UHGV-0152755_20	UniRef90	UniRef90_UPI0015D26941	NA	NA
UHGV-0152755_20	eggNOG-mapper	365659.smi_0429	NA	NA
UHGV-0152755_20	Pfam	PF07852	NA	DUF1642
UHGV-0152755_20	Structural annotation	PF07852	NA	NA
UHGV-0152755_21	PHROG	phrog_5415	NA	unknown function
UHGV-0152755_22	PHROG	phrog_1994	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0152755_22	UniRef90	UniRef90_UPI00191316F6	helix-turn-helix domain-containing protein	NA
UHGV-0152755_22	eggNOG-mapper	85154.O34051_BPO12	sequence-specific DNA binding	NA
UHGV-0152755_22	Structural annotation	PF12643, MF_01020, NF001613, COG0140	NA	NA
UHGV-0152755_23	PHROG	phrog_884	NA	unknown function
UHGV-0152755_23	UniRef90	UniRef90_UPI00189C1773	NA	NA
UHGV-0152755_23	eggNOG-mapper	365659.smi_0433	NA	NA
UHGV-0152755_23	Pfam	PF07116	NA	DUF1372
UHGV-0152755_23	Structural annotation	PF07116	NA	NA
UHGV-0152755_24	PHROG	phrog_1814	NA	unknown function
UHGV-0152755_24	UniRef90	UniRef90_UPI0019194F7A	NA	NA
UHGV-0152755_24	Pfam	PF07067	NA	DUF1340
UHGV-0152755_24	Structural annotation	PF07067	NA	NA
UHGV-0152755_25	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-0152755_25	UniRef90	UniRef90_A0A286QR68	ArpU late transcriptional regulator	NA
UHGV-0152755_25	eggNOG-mapper	173707.Q938L8_9CAUD	NA	NA
UHGV-0152755_25	NCBIFam	TIGR01637.1	ArpU family phage packaging/lysis transcriptional regulator	NA
UHGV-0152755_25	Structural annotation	PF05263, MF_00674, TIGR01637, COG1191	NA	NA
UHGV-0152755_26	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0152755_26	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0152755_26	UniRef90	UniRef90_A0A1F2H8L2	Terminase	NA
UHGV-0152755_26	eggNOG-mapper	1054460.SPPN_00130	DNA packaging	NA
UHGV-0152755_26	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0152755_26	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0152755_26	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0152755_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0152755_27	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0152755_27	UniRef90	UniRef90_A0A2C5WCW2	PBSX family phage terminase large subunit	NA
UHGV-0152755_27	eggNOG-mapper	646413.C5IUJ1_9CAUD	Pfam:Terminase_3C	NA
UHGV-0152755_27	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0152755_27	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0152755_27	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0152755_27	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0152755_28	PHROG	phrog_533	portal protein	head and packaging
UHGV-0152755_28	UniRef90	UniRef90_UPI0011703CB6	phage portal protein	NA
UHGV-0152755_28	eggNOG-mapper	646413.C5IUJ2_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0152755_28	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0152755_28	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0152755_28	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0152755_29	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0152755_29	UniRef90	UniRef90_UPI00093CB0BE	phage minor capsid protein	NA
UHGV-0152755_29	eggNOG-mapper	646413.C5IUJ3_9CAUD	Phage minor capsid protein 2	NA
UHGV-0152755_29	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0152755_29	Structural annotation	PF06152	NA	NA
UHGV-0152755_30	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0152755_30	UniRef90	UniRef90_A0A3S4MNS5	Putative scaffolding protein	NA
UHGV-0152755_30	eggNOG-mapper	646413.C5IUJ4_9CAUD	Phage minor structural protein GP20	NA
UHGV-0152755_30	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0152755_31	PHROG	phrog_544	major head protein	head and packaging
UHGV-0152755_31	UniRef90	UniRef90_C5IUJ5	Major head protein	NA
UHGV-0152755_31	eggNOG-mapper	646413.C5IUJ5_9CAUD	peptidase activity	NA
UHGV-0152755_31	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0152755_31	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0152755_32	UniRef90	UniRef90_A0A3S4QL55	Transcription termination factor	NA
UHGV-0152755_32	Pfam	PF07498	Rho termination factor, N-terminal domain	Rho_N
UHGV-0152755_32	COG	COG0292	Ribosomal protein L20	NA
UHGV-0152755_32	Structural annotation	PF07498	NA	NA
UHGV-0152755_33	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0152755_33	UniRef90	UniRef90_A0A3S4LW47	NA	NA
UHGV-0152755_33	eggNOG-mapper	646413.C5IUJ7_9CAUD	NA	NA
UHGV-0152755_34	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0152755_34	UniRef90	UniRef90_A0A2C5WI04	Minor capsid protein	NA
UHGV-0152755_34	eggNOG-mapper	537874.B3GW07_9CAUD	Minor capsid protein	NA
UHGV-0152755_34	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0152755_34	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0152755_35	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0152755_35	UniRef90	UniRef90_UPI00093F38D1	minor capsid protein	NA
UHGV-0152755_35	eggNOG-mapper	646413.C5IUJ8_9CAUD	Minor capsid protein	NA
UHGV-0152755_35	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0152755_35	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0152755_36	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0152755_36	UniRef90	UniRef90_A0A2C5WHK7	Capsid protein	NA
UHGV-0152755_36	eggNOG-mapper	646413.C5IUJ9_9CAUD	Minor capsid protein from bacteriophage	NA
UHGV-0152755_36	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0152755_36	Structural annotation	PF12691	NA	NA
UHGV-0152755_37	PHROG	phrog_820	major tail protein	tail
UHGV-0152755_37	UniRef90	UniRef90_A0A448A8F6	Tail shaft protein	NA
UHGV-0152755_37	eggNOG-mapper	646413.C5IUK0_9CAUD	NA	NA
UHGV-0152755_37	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0152755_38	PHROG	phrog_1061	NA	unknown function
UHGV-0152755_38	UniRef90	UniRef90_A0A139RN56	NA	NA
UHGV-0152755_38	eggNOG-mapper	1035189.HMPREF9954_0315	NA	NA
UHGV-0152755_38	Structural annotation	PF10666	NA	NA
UHGV-0152755_39	PHROG	phrog_706	NA	unknown function
UHGV-0152755_39	UniRef90	UniRef90_UPI001172F873	Gp15 family bacteriophage protein	NA
UHGV-0152755_39	eggNOG-mapper	646413.C5IUK2_9CAUD	Bacteriophage Gp15 protein	NA
UHGV-0152755_39	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0152755_39	Structural annotation	PF06854	NA	NA
UHGV-0152755_40	PHROG	phrog_1204	tail protein	tail
UHGV-0152755_40	UniRef90	UniRef90_A0A564TR49	Secretion system effector C (SseC) like family protein	NA
UHGV-0152755_40	eggNOG-mapper	646413.C5IUK3_9CAUD	transmembrane transport	NA
UHGV-0152755_40	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0152755_41	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0152755_41	UniRef90	UniRef90_A0A3S4NZK7	Prophage Lp1 protein 51	NA
UHGV-0152755_41	eggNOG-mapper	646413.C5IUK4_9CAUD	NA	NA
UHGV-0152755_41	Structural annotation	PF20195, PF21621, TIGR01633, COG4722	NA	NA
UHGV-0152755_42	PHROG	phrog_3558	tail protein	tail
UHGV-0152755_42	UniRef90	UniRef90_A0A2C5WEG8	Prophage_tail domain-containing protein	NA
UHGV-0152755_42	eggNOG-mapper	646413.C5IUK5_9CAUD	peptidoglycan catabolic process	NA
UHGV-0152755_42	Pfam	PF08481	GBS Bsp-like repeat	GBS_Bsp-like
UHGV-0152755_42	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0152755_42	Structural annotation	PF14594, PF08481, TIGR01665, COG4926, COG3330	NA	NA
UHGV-0152755_43	PHROG	phrog_17240	NA	unknown function
UHGV-0152755_43	UniRef90	UniRef90_A0A8B1YVU1	SGNH/GDSL hydrolase family protein	NA
UHGV-0152755_43	eggNOG-mapper	1349822.NSB1T_12060	NA	NA
UHGV-0152755_43	Structural annotation	PF16255, PF07100, NF007403	NA	NA
UHGV-0152755_44	PHROG	phrog_4257	NA	unknown function
UHGV-0152755_44	UniRef90	UniRef90_A0A1L2JYP2	Transcription termination factor	NA
UHGV-0152755_44	eggNOG-mapper	997830.HMPREF1124_0612	NA	NA