UHGV-0156355

Genome information

Genome length 31,750 bps

CDS count 50

Completeness 62.25% (medium-quality)

geNomad score 0.9819

Prediction confidence Confident

Genome information
Genome ID	UHGV-0156355
vOTU ID	vOTU-022113
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_456402
BioSample	SAMN05971521
Country	United States
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.25% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9819
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.85
Jumbo phage	No

Genome content
Genome length	31,750 bps
GC content	49.43%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	50
CDS density	90.44%
Average CDS length	577.44 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0156355_1	UniRef90	UniRef90_UPI001C3A10B1	Zinc ribbon domain-containing protein	NA
UHGV-0156355_1	eggNOG-mapper	1226322.HMPREF1545_00023	NA	NA
UHGV-0156355_2	PHROG	phrog_924	NA	unknown function
UHGV-0156355_2	UniRef90	UniRef90_U2SKB7	NA	NA
UHGV-0156355_2	Pfam	PF04448	NA	DUF551
UHGV-0156355_3	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-0156355_3	eggNOG-mapper	428125.CLOLEP_01816	COG NOG12663 non supervised orthologous group	NA
UHGV-0156355_3	Structural annotation	PF11124, MF_02210, NF040502, COG3818	NA	NA
UHGV-0156355_4	PHROG	phrog_38832	NA	unknown function
UHGV-0156355_4	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-0156355_5	PHROG	phrog_22543	NA	unknown function
UHGV-0156355_8	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-0156355_8	UniRef90	UniRef90_A0A810QB82	NA	NA
UHGV-0156355_8	eggNOG-mapper	1100790.H2ELW3_9CAUD	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-0156355_8	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0156355_8	Structural annotation	PF18909	NA	NA
UHGV-0156355_9	UniRef90	UniRef90_UPI00156FA052	NA	NA
UHGV-0156355_9	eggNOG-mapper	1227349.C170_11270	NA	NA
UHGV-0156355_9	Structural annotation	PF16475	NA	NA
UHGV-0156355_10	PHROG	phrog_8684	NA	unknown function
UHGV-0156355_10	UniRef90	UniRef90_UPI00195CB2B3	YopX family protein	NA
UHGV-0156355_10	eggNOG-mapper	1226322.HMPREF1545_00036	YopX protein	NA
UHGV-0156355_10	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0156355_13	PHROG	phrog_2717	NA	unknown function
UHGV-0156355_13	eggNOG-mapper	552398.HMPREF0866_02231	NA	NA
UHGV-0156355_14	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0156355_14	UniRef90	UniRef90_A0A1V0QCE9	Bro-N domain-containing protein	NA
UHGV-0156355_14	eggNOG-mapper	411467.BACCAP_02726	BRO family, N-terminal domain	NA
UHGV-0156355_14	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0156355_14	COG	COG3617	Prophage antirepressor	NA
UHGV-0156355_14	Structural annotation	PF02498, TIGR02681, COG3617	NA	NA
UHGV-0156355_15	UniRef90	UniRef90_UPI0018A8F249	helix-turn-helix domain containing protein	NA
UHGV-0156355_15	eggNOG-mapper	1235790.C805_00037	NA	NA
UHGV-0156355_15	Structural annotation	PF13542	NA	NA
UHGV-0156355_16	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0156355_16	PHROG	phrog_10250	NA	unknown function
UHGV-0156355_16	UniRef90	UniRef90_UPI0018AC3323	PBSX family phage terminase large subunit	NA
UHGV-0156355_16	eggNOG-mapper	476272.RUMHYD_01756	NA	NA
UHGV-0156355_16	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0156355_16	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0156355_16	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0156355_16	COG	COG1783	Phage terminase large subunit	NA
UHGV-0156355_16	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0156355_17	PHROG	phrog_533	portal protein	head and packaging
UHGV-0156355_17	UniRef90	UniRef90_UPI00189D71DB	phage capsid protein	NA
UHGV-0156355_17	eggNOG-mapper	1232443.BAIA02000078_gene36	NA	NA
UHGV-0156355_17	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0156355_18	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0156355_18	UniRef90	UniRef90_UPI001D080D49	phage minor capsid protein	NA
UHGV-0156355_18	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0156355_18	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0156355_18	COG	COG2369	NA	NA
UHGV-0156355_18	Structural annotation	PF06152, PF15542, TIGR01641, COG2369	NA	NA
UHGV-0156355_20	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0156355_20	UniRef90	UniRef90_A0A2Z4Q9Y8	Minor structural protein	NA
UHGV-0156355_20	eggNOG-mapper	1232443.BAIA02000078_gene31	NA	NA
UHGV-0156355_20	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0156355_20	Structural annotation	PF06810	NA	NA
UHGV-0156355_21	PHROG	phrog_909	major head protein	head and packaging
UHGV-0156355_21	UniRef90	UniRef90_K1TUL5	NA	NA
UHGV-0156355_21	eggNOG-mapper	1497679.EP56_02915	NA	NA
UHGV-0156355_21	Structural annotation	PF02924	NA	NA
UHGV-0156355_22	PHROG	phrog_29	major head protein	head and packaging
UHGV-0156355_22	UniRef90	UniRef90_UPI0004AE1FFD	major capsid protein	NA
UHGV-0156355_22	eggNOG-mapper	1232443.BAIA02000078_gene29	Phage major capsid protein E	NA
UHGV-0156355_22	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0156355_22	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0156355_23	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0156355_23	eggNOG-mapper	1120998.AUFC01000030_gene2237	NA	NA
UHGV-0156355_24	PHROG	phrog_3366	NA	unknown function
UHGV-0156355_24	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0156355_24	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0156355_25	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0156355_25	UniRef90	UniRef90_A0A2U1BEM0	Minor capsid protein	NA
UHGV-0156355_25	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0156355_25	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0156355_25	Structural annotation	PF11114	NA	NA
UHGV-0156355_26	PHROG	phrog_3266	tail completion	connector
UHGV-0156355_26	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0156355_26	Structural annotation	PF12691	NA	NA
UHGV-0156355_27	PHROG	phrog_3099	NA	unknown function
UHGV-0156355_27	eggNOG-mapper	1232443.BAIA02000078_gene23	NA	NA
UHGV-0156355_27	Structural annotation	TIGR02126	NA	NA
UHGV-0156355_28	PHROG	phrog_11299	NA	unknown function
UHGV-0156355_28	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0156355_28	Structural annotation	PF10666	NA	NA
UHGV-0156355_29	PHROG	phrog_706	NA	unknown function
UHGV-0156355_29	UniRef90	UniRef90_UPI001D069FB9	Gp15 family bacteriophage protein	NA
UHGV-0156355_29	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-0156355_29	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0156355_29	Structural annotation	PF06854	NA	NA
UHGV-0156355_30	PHROG	phrog_33872	NA	unknown function
UHGV-0156355_30	eggNOG-mapper	445972.ANACOL_00292	NA	NA
UHGV-0156355_32	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0156355_32	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-0156355_32	eggNOG-mapper	693746.OBV_18190	domain protein	NA
UHGV-0156355_32	COG	COG1511	NA	NA
UHGV-0156355_32	Structural annotation	PF05546, TIGR02559	NA	NA
UHGV-0156355_33	PHROG	phrog_1194	NA	unknown function
UHGV-0156355_33	eggNOG-mapper	1232443.BAIA02000078_gene17	NA	NA
UHGV-0156355_33	Structural annotation	PF20458, TIGR02126, COG5437	NA	NA
UHGV-0156355_34	PHROG	phrog_6616	tail protein	tail
UHGV-0156355_34	UniRef90	UniRef90_A0A2Z4QA17	KID repeat-containing protein	NA
UHGV-0156355_34	eggNOG-mapper	1235797.C816_04180	NA	NA
UHGV-0156355_34	Structural annotation	PF21683, TIGR02126, COG4379	NA	NA
UHGV-0156355_35	PHROG	phrog_1980	tail fiber protein	tail
UHGV-0156355_35	UniRef90	UniRef90_A0A810QCC8	Peptidase S74 domain-containing protein	NA
UHGV-0156355_35	eggNOG-mapper	1235797.C816_04179	Chaperone of endosialidase	NA
UHGV-0156355_35	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0156355_35	Structural annotation	PF07902, NF041249	NA	NA
UHGV-0156355_37	eggNOG-mapper	1235797.C816_04177	alginic acid biosynthetic process	NA
UHGV-0156355_37	COG	COG1511	NA	NA
UHGV-0156355_39	PHROG	phrog_19695	NA	unknown function
UHGV-0156355_39	eggNOG-mapper	476272.RUMHYD_01995	NA	NA
UHGV-0156355_40	eggNOG-mapper	742733.HMPREF9469_01803	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0156355_40	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0156355_42	PHROG	phrog_25747	tail fiber protein	tail
UHGV-0156355_42	UniRef90	UniRef90_UPI001C0FAC9B	tail fiber protein	NA
UHGV-0156355_42	eggNOG-mapper	641147.HMPREF9021_01771	Phage Tail Collar Domain	NA
UHGV-0156355_42	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-0156355_42	COG	COG4675	Phage tail collar domain	NA
UHGV-0156355_42	Structural annotation	PF07484, COG4675	NA	NA
UHGV-0156355_46	eggNOG-mapper	445972.ANACOL_03381	NA	NA
UHGV-0156355_48	PHROG	phrog_13256	NA	unknown function
UHGV-0156355_48	eggNOG-mapper	1226322.HMPREF1545_00132	NA	NA
UHGV-0156355_49	eggNOG-mapper	1226322.HMPREF1545_00070	Ami_2	NA
UHGV-0156355_49	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0156355_50	KOfam	K11690	dctM; C4-dicarboxylate transporter, DctM subunit	NA
UHGV-0156355_50	UniRef90	UniRef90_A0A810Q8I3	DctM domain-containing protein	NA
UHGV-0156355_50	eggNOG-mapper	1235797.C816_02742	Tripartite ATP-independent periplasmic transporter, DctM component	NA
UHGV-0156355_50	Pfam	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component	DctM
UHGV-0156355_50	COG	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component	NA