UHGV-0157150

Genome information

Genome length 32,033 bps

CDS count 46

Completeness 90.22% (high-quality)

geNomad score 0.9767

Prediction confidence Confident

Genome information
Genome ID	UHGV-0157150
vOTU ID	vOTU-070147
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_462071
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.22% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9767
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.26
Jumbo phage	No

Genome content
Genome length	32,033 bps
GC content	41.49%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	46
CDS density	91.97%
Average CDS length	643.57 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0157150_1	eggNOG-mapper	742733.HMPREF9469_01238	NA	NA
UHGV-0157150_1	AcrCatalog	cluster_9196	NA	NA
UHGV-0157150_1	Pfam	PF21757	NA	DUF6870
UHGV-0157150_2	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0157150_2	PHROG	phrog_95	integrase	integration and excision
UHGV-0157150_2	UniRef90	UniRef90_G5HF75	Recombinase domain-containing protein	NA
UHGV-0157150_2	eggNOG-mapper	742741.HMPREF9475_01937	Resolvase, N terminal domain	NA
UHGV-0157150_2	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0157150_2	Pfam	PF07508	Recombinase	Recombinase
UHGV-0157150_2	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0157150_2	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0157150_2	Structural annotation	PF07508, PF00239, PF18822, NF041201, COG1961	NA	NA
UHGV-0157150_3	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0157150_3	UniRef90	UniRef90_A0A2N0UYY1	Phage-related protein	NA
UHGV-0157150_3	eggNOG-mapper	1160721.RBI_II00528	Phage tail tape measure protein, TP901 family	NA
UHGV-0157150_3	COG	COG1006	Multisubunit Na+/H+ antiporter, MnhC subunit	NA
UHGV-0157150_4	PHROG	phrog_5319	outer membrane protein	other
UHGV-0157150_4	UniRef90	UniRef90_A0A1Q6JN93	zinc_ribbon_2 domain-containing protein	NA
UHGV-0157150_4	eggNOG-mapper	1042156.CXIVA_15870	sh3 domain protein	NA
UHGV-0157150_4	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0157150_4	COG	COG3103	NA	NA
UHGV-0157150_4	Structural annotation	PF03843, PF12773, MF_00984, TIGR00752, COG3065	NA	NA
UHGV-0157150_5	PHROG	phrog_8355	NA	unknown function
UHGV-0157150_5	UniRef90	UniRef90_UPI001C0B4BD8	Gp15 family bacteriophage protein	NA
UHGV-0157150_5	eggNOG-mapper	1415775.U729_2613	NA	NA
UHGV-0157150_6	PHROG	phrog_8300	NA	unknown function
UHGV-0157150_6	eggNOG-mapper	483218.BACPEC_01148	NA	NA
UHGV-0157150_6	Structural annotation	PF06854	NA	NA
UHGV-0157150_7	PHROG	phrog_820	major tail protein	tail
UHGV-0157150_7	eggNOG-mapper	1282664.H354_06691	NA	NA
UHGV-0157150_7	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0157150_8	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0157150_8	UniRef90	UniRef90_UPI001D0627B3	minor capsid protein	NA
UHGV-0157150_8	eggNOG-mapper	1123263.AUKY01000051_gene1075	NA	NA
UHGV-0157150_8	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0157150_8	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0157150_9	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0157150_9	eggNOG-mapper	483218.BACPEC_01151	NA	NA
UHGV-0157150_10	PHROG	phrog_8710	NA	unknown function
UHGV-0157150_10	eggNOG-mapper	33035.JPJF01000093_gene2249	NA	NA
UHGV-0157150_10	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0157150_11	eggNOG-mapper	483218.BACPEC_01153	NA	NA
UHGV-0157150_12	PHROG	phrog_422	major head protein	head and packaging
UHGV-0157150_12	UniRef90	UniRef90_UPI001C03381A	phage capsid protein	NA
UHGV-0157150_12	eggNOG-mapper	445972.ANACOL_01845	NA	NA
UHGV-0157150_12	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0157150_13	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0157150_13	eggNOG-mapper	1304866.K413DRAFT_0806	NA	NA
UHGV-0157150_14	PHROG	phrog_2616	NA	unknown function
UHGV-0157150_14	Structural annotation	PF01281	NA	NA
UHGV-0157150_15	PHROG	phrog_20195	NA	unknown function
UHGV-0157150_16	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0157150_16	UniRef90	UniRef90_A0A373KU77	Minor capsid protein	NA
UHGV-0157150_16	eggNOG-mapper	742740.HMPREF9474_03503	Phage minor capsid protein 2	NA
UHGV-0157150_16	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0157150_16	COG	COG2369	NA	NA
UHGV-0157150_16	Structural annotation	PF06152	NA	NA
UHGV-0157150_17	PHROG	phrog_533	portal protein	head and packaging
UHGV-0157150_17	UniRef90	UniRef90_A0A3D0XB31	Capsid protein	NA
UHGV-0157150_17	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-0157150_17	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0157150_18	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0157150_18	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0157150_18	UniRef90	UniRef90_A0A374N1S8	Terminase	NA
UHGV-0157150_18	eggNOG-mapper	1282664.H354_06621	Phage terminase, large subunit, PBSX family	NA
UHGV-0157150_18	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0157150_18	COG	COG1783	Phage terminase large subunit	NA
UHGV-0157150_18	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0157150_19	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0157150_19	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0157150_19	UniRef90	UniRef90_A0A2N0UXP4	Terminase small subunit	NA
UHGV-0157150_19	eggNOG-mapper	1160721.RBI_II00483	DNA packaging	NA
UHGV-0157150_19	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0157150_19	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0157150_19	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0157150_20	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0157150_20	UniRef90	UniRef90_A0A2N0UXQ6	NA	NA
UHGV-0157150_20	eggNOG-mapper	1401067.HMPREF0872_06835	NA	NA
UHGV-0157150_20	Pfam	PF07374	NA	DUF1492
UHGV-0157150_20	Structural annotation	PF07374, MF_00674, TIGR01636, COG2739	NA	NA
UHGV-0157150_21	Structural annotation	PF14282, COG5570	NA	NA
UHGV-0157150_23	Structural annotation	PF19824, MF_01506	NA	NA
UHGV-0157150_25	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0157150_25	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0157150_25	UniRef90	UniRef90_A0A2N0ULU7	SF3 helicase domain-containing protein	NA
UHGV-0157150_25	eggNOG-mapper	1410670.JHXF01000015_gene2274	Phage plasmid primase, P4 family	NA
UHGV-0157150_25	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0157150_25	Pfam	PF19263	NA	DUF5906
UHGV-0157150_25	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0157150_25	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0157150_25	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0157150_25	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF011296, COG3378, COG4983	NA	NA
UHGV-0157150_26	PHROG	phrog_378	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0157150_26	UniRef90	UniRef90_A0A374ND86	NA	NA
UHGV-0157150_26	eggNOG-mapper	1410670.JHXF01000015_gene2272	NA	NA
UHGV-0157150_26	Pfam	PF05037	NA	DUF669
UHGV-0157150_26	Structural annotation	PF05037, NF004948	NA	NA
UHGV-0157150_27	PHROG	phrog_5702	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0157150_27	UniRef90	UniRef90_A0A374N329	VRR-NUC domain-containing protein	NA
UHGV-0157150_27	eggNOG-mapper	1410670.JHXF01000015_gene2271	VRR_NUC	NA
UHGV-0157150_27	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0157150_27	Structural annotation	PF01870, MF_00130, NF002581, COG1591	NA	NA
UHGV-0157150_28	KOfam	K19789	radD; DNA repair protein RadD	NA
UHGV-0157150_28	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0157150_28	UniRef90	UniRef90_A0A374N1T8	Helicase	NA
UHGV-0157150_28	eggNOG-mapper	1410670.JHXF01000015_gene2270	helicase	NA
UHGV-0157150_28	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0157150_28	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0157150_28	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0157150_28	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0157150_28	Structural annotation	PF04851, PF00271, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-0157150_29	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0157150_29	UniRef90	UniRef90_UPI001A9B3ECC	AAA family ATPase	NA
UHGV-0157150_29	eggNOG-mapper	754027.HMPREF9554_00709	NA	NA
UHGV-0157150_29	Pfam	PF13479	AAA domain	AAA_24
UHGV-0157150_29	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0157150_30	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0157150_30	UniRef90	UniRef90_UPI0019171ADA	siphovirus Gp157 family protein	NA
UHGV-0157150_30	eggNOG-mapper	1027396.LMOSA_21290	Siphovirus Gp157	NA
UHGV-0157150_30	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0157150_30	Structural annotation	PF05565	NA	NA
UHGV-0157150_31	PHROG	phrog_15609	NA	unknown function
UHGV-0157150_31	UniRef90	UniRef90_A0A373VML2	NA	NA
UHGV-0157150_31	eggNOG-mapper	641112.ACOK01000073_gene2872	NA	NA
UHGV-0157150_31	Structural annotation	PF11300, NF033725	NA	NA
UHGV-0157150_33	eggNOG-mapper	1235835.C814_03153	NA	NA
UHGV-0157150_33	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0157150_36	PHROG	phrog_1305	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0157150_36	UniRef90	UniRef90_A0A413K8G3	NA	NA
UHGV-0157150_36	eggNOG-mapper	445974.CLORAM_02962	NA	NA
UHGV-0157150_36	Structural annotation	COG2250	NA	NA
UHGV-0157150_37	PHROG	phrog_3882	NA	unknown function
UHGV-0157150_38	PHROG	phrog_2232	NA	unknown function
UHGV-0157150_38	UniRef90	UniRef90_UPI00164B82D7	NA	NA
UHGV-0157150_38	eggNOG-mapper	748224.HMPREF9436_01448	NA	NA
UHGV-0157150_38	Pfam	PF14337	Abortive infection alpha	Abi_alpha
UHGV-0157150_38	Structural annotation	PF14337, TIGR03899	NA	NA
UHGV-0157150_40	UniRef90	UniRef90_A0A2N0UXQ7	HTH cro/C1-type domain-containing protein	NA
UHGV-0157150_40	eggNOG-mapper	78346.BRUM_0420	NA	NA
UHGV-0157150_40	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0157150_40	Structural annotation	PF05339, NF041951, COG1396	NA	NA
UHGV-0157150_41	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0157150_41	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0157150_41	UniRef90	UniRef90_A0A2N0UXR0	LexA repressor	NA
UHGV-0157150_41	eggNOG-mapper	246199.CUS_5911	NA	NA
UHGV-0157150_41	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0157150_41	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0157150_41	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0157150_41	Structural annotation	PF00717, PF12844, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-0157150_42	KOfam	K21463	tcaA; membrane-associated protein TcaA	NA
UHGV-0157150_42	UniRef90	UniRef90_A0A412DWX4	Tetratricopeptide repeat protein	NA
UHGV-0157150_42	Pfam	PF13428	Tetratricopeptide repeat	TPR_14
UHGV-0157150_43	Structural annotation	PF20505, MF_00194, NF001462, COG2974	NA	NA
UHGV-0157150_44	Structural annotation	PF15968	NA	NA
UHGV-0157150_45	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0157150_45	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0157150_45	UniRef90	UniRef90_A0A374NFM5	XRE family transcriptional regulator	NA
UHGV-0157150_45	eggNOG-mapper	1196029.ALIM01000022_gene950	Helix-turn-helix XRE-family like proteins	NA
UHGV-0157150_45	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0157150_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0157150_45	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0157150_45	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0157150_46	KOfam	K14059	int; integrase	NA
UHGV-0157150_46	PHROG	phrog_1	integrase	integration and excision
UHGV-0157150_46	UniRef90	UniRef90_A0A412L7T7	Site-specific integrase	NA
UHGV-0157150_46	eggNOG-mapper	1540257.JQMW01000011_gene2033	Phage integrase family	NA
UHGV-0157150_46	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0157150_46	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0157150_46	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA