UHGV-0157692

Genome information

Genome length 32,293 bps

CDS count 49

Completeness 54.43% (medium-quality)

geNomad score 0.9774

Prediction confidence Confident

Genome information
Genome ID	UHGV-0157692
vOTU ID	vOTU-027818
vOTU representative	Yes
Source dataset	GPD
Original genome ID	uvig_492820
BioSample	SAMN06110084
Country	Netherlands
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	54.43% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	5
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9774
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.85
Jumbo phage	No

Genome content
Genome length	32,293 bps
GC content	39.54%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	49
CDS density	85.41%
Average CDS length	565.22 bps
tRNA count	3
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0157692_1	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-0157692_1	PHROG	phrog_5240	tail fiber protein	tail
UHGV-0157692_1	eggNOG-mapper	1166130.H650_02700	lipolytic protein G-D-S-L family	NA
UHGV-0157692_1	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0157692_1	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0157692_3	PHROG	phrog_13589	NA	unknown function
UHGV-0157692_3	eggNOG-mapper	428125.CLOLEP_01434	NA	NA
UHGV-0157692_4	PHROG	phrog_13589	NA	unknown function
UHGV-0157692_4	eggNOG-mapper	742733.HMPREF9469_05009	NA	NA
UHGV-0157692_5	PHROG	phrog_31538	NA	unknown function
UHGV-0157692_5	eggNOG-mapper	428125.CLOLEP_01433	NA	NA
UHGV-0157692_6	PHROG	phrog_15594	NA	unknown function
UHGV-0157692_6	eggNOG-mapper	862969.SCI_1223	NA	NA
UHGV-0157692_6	Structural annotation	PF16640, TIGR04488	NA	NA
UHGV-0157692_7	eggNOG-mapper	1304866.K413DRAFT_0769	NA	NA
UHGV-0157692_8	PHROG	phrog_18725	NA	unknown function
UHGV-0157692_8	eggNOG-mapper	742740.HMPREF9474_03517	NA	NA
UHGV-0157692_9	PHROG	phrog_13879	NA	unknown function
UHGV-0157692_9	eggNOG-mapper	1235800.C819_00474	NA	NA
UHGV-0157692_9	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-0157692_10	PHROG	phrog_1194	NA	unknown function
UHGV-0157692_10	eggNOG-mapper	742740.HMPREF9474_03515	NA	NA
UHGV-0157692_10	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0157692_11	PHROG	phrog_167	tail length tape measure protein	tail
UHGV-0157692_11	UniRef90	UniRef90_A0A415D594	SLT domain-containing protein	NA
UHGV-0157692_11	eggNOG-mapper	397290.C810_01419	Transglycosylase SLT domain	NA
UHGV-0157692_11	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0157692_11	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-0157692_11	Structural annotation	PF15871, COG5280	NA	NA
UHGV-0157692_13	UniRef90	UniRef90_UPI001D0975F6	NA	NA
UHGV-0157692_13	Structural annotation	PF16478	NA	NA
UHGV-0157692_14	UniRef90	UniRef90_A0A8D9PGN2	Major tail protein	NA
UHGV-0157692_14	Structural annotation	PF16463, TIGR02126, COG5437	NA	NA
UHGV-0157692_15	Structural annotation	PF05657	NA	NA
UHGV-0157692_16	eggNOG-mapper	1298920.KI911353_gene2654	NA	NA
UHGV-0157692_17	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0157692_18	PHROG	phrog_1129	holin	lysis
UHGV-0157692_18	UniRef90	UniRef90_A0A8D9UII9	Holin	NA
UHGV-0157692_18	eggNOG-mapper	411461.DORFOR_00721	NA	NA
UHGV-0157692_18	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0157692_18	Structural annotation	PF06946	NA	NA
UHGV-0157692_19	PHROG	phrog_1863	NA	unknown function
UHGV-0157692_19	eggNOG-mapper	1232452.BAIB02000007_gene1606	NA	NA
UHGV-0157692_20	UniRef90	UniRef90_A0A3D4KY33	DNA-packaging protein	NA
UHGV-0157692_20	eggNOG-mapper	1298920.KI911353_gene2658	NA	NA
UHGV-0157692_21	UniRef90	UniRef90_A0A416G2T8	Rho_N domain-containing protein	NA
UHGV-0157692_21	Structural annotation	PF21169	NA	NA
UHGV-0157692_22	PHROG	phrog_29	major head protein	head and packaging
UHGV-0157692_22	UniRef90	UniRef90_A0A1C5WIT9	Phage major capsid protein E	NA
UHGV-0157692_22	eggNOG-mapper	1347368.HG964404_gene4993	Phage major capsid protein E	NA
UHGV-0157692_22	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0157692_22	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0157692_23	PHROG	phrog_909	major head protein	head and packaging
UHGV-0157692_23	UniRef90	UniRef90_R7BGI8	Phage major capsid protein	NA
UHGV-0157692_23	eggNOG-mapper	1536772.R70723_06665	NA	NA
UHGV-0157692_24	UniRef90	UniRef90_R6C0B6	Phage capsid scaffolding protein	NA
UHGV-0157692_26	PHROG	phrog_3377	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0157692_26	UniRef90	UniRef90_A0A1Y4FBI7	HTH psq-type domain-containing protein	NA
UHGV-0157692_26	eggNOG-mapper	1129192.A0A0E3D9L6_9CAUD	sequence-specific DNA binding transcription factor activity	NA
UHGV-0157692_27	PHROG	phrog_64	portal protein	head and packaging
UHGV-0157692_27	UniRef90	UniRef90_A0A173UGW9	Phage portal protein, SPP1 family	NA
UHGV-0157692_27	eggNOG-mapper	1298920.KI911353_gene2663	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0157692_27	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0157692_27	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0157692_28	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0157692_28	UniRef90	UniRef90_A0A7C6D6F2	Sigma70_r4 domain-containing protein	NA
UHGV-0157692_28	eggNOG-mapper	1321786.HMPREF1992_00364	sigma factor activity	NA
UHGV-0157692_28	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0157692_28	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0157692_29	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0157692_29	UniRef90	UniRef90_A0A4Q5C857	Terminase_6C domain-containing protein	NA
UHGV-0157692_29	eggNOG-mapper	397290.C810_01390	chromosome segregation	NA
UHGV-0157692_29	COG	COG5410	NA	NA
UHGV-0157692_29	Structural annotation	PF17289, PF03237, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0157692_31	Pfam	PF05225	helix-turn-helix, Psq domain	HTH_psq
UHGV-0157692_31	Structural annotation	PF05225, COG2886	NA	NA
UHGV-0157692_40	Structural annotation	PF06004, NF033216, COG4568	NA	NA
UHGV-0157692_41	eggNOG-mapper	397290.C810_01353	NA	NA
UHGV-0157692_43	Structural annotation	PF13107	NA	NA
UHGV-0157692_44	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0157692_44	UniRef90	UniRef90_A0A3R6B3D9	XRE family transcriptional regulator	NA
UHGV-0157692_44	eggNOG-mapper	394503.Ccel_3173	NA	NA
UHGV-0157692_44	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0157692_46	Structural annotation	PF18267	NA	NA
UHGV-0157692_48	KOfam	K03466	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	NA
UHGV-0157692_48	PHROG	phrog_1358	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UHGV-0157692_48	UniRef90	UniRef90_A0A1C5UE43	Stage III sporulation protein E	NA
UHGV-0157692_48	eggNOG-mapper	1007104.SUS17_2040	DNA segregation ATPase FtsK SpoIIIE	NA
UHGV-0157692_48	PADLOC	SspH_00004	SspH	SSP
UHGV-0157692_48	Pfam	PF01580	FtsK/SpoIIIE family	FtsK_SpoIIIE
UHGV-0157692_48	COG	COG1674	DNA segregation ATPase FtsK/SpoIIIE or related protein	NA
UHGV-0157692_48	Structural annotation	PF01580, MF_00350, TIGR03925, COG0433	NA	NA