| Genome information | |
|---|---|
| Genome ID | UHGV-0190333 |
| vOTU ID | vOTU-005530 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN00715261_a1_ct33378_vs1@linear@Siphoviridae__sp._ctT1n1 |
| BioSample | SAMN00715261 |
| Country | China |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 49.26% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 8 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9650 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Plasmid |
| viralVerify score | 12.61 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 23,200 bps |
| GC content | 40.41% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 41 |
| CDS density | 91.35% |
| Average CDS length | 522.88 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |