| Genome information | |
|---|---|
| Genome ID | UHGV-0192114 |
| vOTU ID | vOTU-060292 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN05827203_a1_ct37787_vs1@linear@Siphoviridae__sp._ctHQv1 |
| BioSample | SAMN05827203 |
| Country | Finland |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 35.23% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 14 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9706 |
| Virus hallmark genes (geNomad) | 11 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 39.66 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 23,303 bps |
| GC content | 44.59% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 29 |
| CDS density | 93.88% |
| Average CDS length | 757.35 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |