UHGV-0192706

Genome information

Genome length 122,809 bps

CDS count 141

Completeness 84.86% (medium-quality)

geNomad score 0.9755

Prediction confidence Confident

Genome information
Genome ID	UHGV-0192706
vOTU ID	vOTU-028871
vOTU representative	Yes
Source dataset	CHVD
Original genome ID	SAMN09781738_a1_ct25808_vs1@Herelleviridae__sp._ctxG71
BioSample	NA
Country	Madagascar
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.86% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	43
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9755
Virus hallmark genes (geNomad)	22
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	47.42
Jumbo phage	No

Genome content
Genome length	122,809 bps
GC content	44.90%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	141
CDS density	91.31%
Average CDS length	797.43 bps
tRNA count	9
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0192706_1	Pfam	PF00644	Poly(ADP-ribose) polymerase catalytic domain	PARP
UHGV-0192706_2	eggNOG-mapper	1122927.KB895420_gene4255	NA	NA
UHGV-0192706_4	PHROG	phrog_12	portal protein	head and packaging
UHGV-0192706_4	UniRef90	UniRef90_S5MMP7	Portal protein	NA
UHGV-0192706_4	eggNOG-mapper	1391188.A0A068EU16_9CAUD	Phage portal protein	NA
UHGV-0192706_4	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0192706_4	Structural annotation	PF04860, MF_04135, TIGR01537, COG5518	NA	NA
UHGV-0192706_5	PHROG	phrog_1028	head maturation protease	head and packaging
UHGV-0192706_5	UniRef90	UniRef90_S5M529	Procapsid protease	NA
UHGV-0192706_5	eggNOG-mapper	857312.D9J0N3_9CAUD	Pfam:Peptidase_S78	NA
UHGV-0192706_5	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0192706_5	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0192706_7	PHROG	phrog_752	major head protein	head and packaging
UHGV-0192706_7	UniRef90	UniRef90_A0A7D3UXB7	Major capsid protein	NA
UHGV-0192706_7	eggNOG-mapper	1284352.AOIG01000022_gene3810	NA	NA
UHGV-0192706_7	Structural annotation	PF17236, MF_04119, NF041162, COG4834	NA	NA
UHGV-0192706_8	PHROG	phrog_3281	endonuclease VII	DNA, RNA and nucleotide metabolism
UHGV-0192706_8	Pfam	PF07498	Rho termination factor, N-terminal domain	Rho_N
UHGV-0192706_9	PHROG	phrog_772	tail fiber protein	tail
UHGV-0192706_9	UniRef90	UniRef90_M4HN97	Putative structural protein	NA
UHGV-0192706_9	eggNOG-mapper	1391188.A0A068EU17_9CAUD	NA	NA
UHGV-0192706_10	PHROG	phrog_1004	virion structural protein	head and packaging
UHGV-0192706_10	eggNOG-mapper	221915.Q6Y7S1_BPPGK	NA	NA
UHGV-0192706_10	Structural annotation	TIGR02215	NA	NA
UHGV-0192706_11	PHROG	phrog_16819	NA	unknown function
UHGV-0192706_11	UniRef90	UniRef90_B6V2P1	Gp7.1	NA
UHGV-0192706_11	eggNOG-mapper	1284352.AOIG01000022_gene3814	NA	NA
UHGV-0192706_12	PHROG	phrog_1000	NA	unknown function
UHGV-0192706_13	PHROG	phrog_21765	NA	unknown function
UHGV-0192706_13	eggNOG-mapper	552398.HMPREF0866_01593	tail collar domain protein	NA
UHGV-0192706_13	Pfam	PF13162	NA	DUF3997
UHGV-0192706_13	COG	COG4675	Phage tail collar domain	NA
UHGV-0192706_14	PHROG	phrog_22284	tail fiber protein	tail
UHGV-0192706_14	eggNOG-mapper	537007.BLAHAN_05238	translation initiation factor activity	NA
UHGV-0192706_14	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0192706_15	eggNOG-mapper	537007.BLAHAN_05238	translation initiation factor activity	NA
UHGV-0192706_15	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0192706_17	PHROG	phrog_279	tail sheath	tail
UHGV-0192706_17	UniRef90	UniRef90_B6V2P4	Tail sheath protein	NA
UHGV-0192706_17	eggNOG-mapper	10685.TSP_BPSP1	Phage tail sheath protein	NA
UHGV-0192706_17	Structural annotation	PF17541, COG4386	NA	NA
UHGV-0192706_18	PHROG	phrog_985	virion structural protein	head and packaging
UHGV-0192706_18	UniRef90	UniRef90_A0A7D3QMU0	Tail tube protein	NA
UHGV-0192706_18	eggNOG-mapper	442493.VPN5_BPPHE	virion	NA
UHGV-0192706_18	Structural annotation	PF09393, TIGR02241, COG5437	NA	NA
UHGV-0192706_19	PHROG	phrog_25000	tail assembly chaperone	tail
UHGV-0192706_21	PHROG	phrog_1047	tail associated lysin	tail
UHGV-0192706_21	COG	COG5412	Phage-related protein	NA
UHGV-0192706_22	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0192706_22	PHROG	phrog_1015	tail protein with lysin activity	tail
UHGV-0192706_22	UniRef90	UniRef90_A0A3S7SGJ9	Tail lysin-like protein	NA
UHGV-0192706_22	eggNOG-mapper	10685.B6V2P9_BPSP1	amidase activity	NA
UHGV-0192706_22	Pfam	PF05257	CHAP domain	CHAP
UHGV-0192706_22	Pfam	PF01476	LysM domain	LysM
UHGV-0192706_22	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0192706_22	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-0192706_23	PHROG	phrog_14236	tail fiber protein	tail
UHGV-0192706_23	UniRef90	UniRef90_F8WPZ8	Tail fiber protein	NA
UHGV-0192706_23	eggNOG-mapper	442493.VPN7_BPPHE	glycerophosphodiester phosphodiesterase activity	NA
UHGV-0192706_24	PHROG	phrog_1011	virion structural protein	head and packaging
UHGV-0192706_24	eggNOG-mapper	442493.A8E287_BPPHE	NA	NA
UHGV-0192706_25	KOfam	K06903	NA	NA
UHGV-0192706_25	PHROG	phrog_975	baseplate protein	tail
UHGV-0192706_25	UniRef90	UniRef90_UPI000C075D95	LysM peptidoglycan-binding domain-containing protein	NA
UHGV-0192706_25	eggNOG-mapper	57477.J9PKX3_9CAUD	lytic transglycosylase activity	NA
UHGV-0192706_25	Pfam	PF01476	LysM domain	LysM
UHGV-0192706_25	Pfam	PF10934	NA	DUF2634
UHGV-0192706_25	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628, COG1388	NA	NA
UHGV-0192706_26	PHROG	phrog_6	baseplate protein	tail
UHGV-0192706_26	UniRef90	UniRef90_UPI001C11C886	baseplate J/gp47 family protein	NA
UHGV-0192706_26	eggNOG-mapper	1391188.A0A068EMN8_9CAUD	Baseplate J-like protein	NA
UHGV-0192706_26	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0192706_26	Structural annotation	PF04865, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0192706_27	PHROG	phrog_7378	baseplate protein	tail
UHGV-0192706_27	eggNOG-mapper	442493.A8E291_BPPHE	NA	NA
UHGV-0192706_28	PHROG	phrog_1394	virion structural protein	head and packaging
UHGV-0192706_28	UniRef90	UniRef90_U5PWK2	Baseplate protein	NA
UHGV-0192706_28	eggNOG-mapper	221915.Q6Y7Q3_BPPGK	virus tail, baseplate	NA
UHGV-0192706_28	Structural annotation	PF09215	NA	NA
UHGV-0192706_29	PHROG	phrog_877	NA	unknown function
UHGV-0192706_29	UniRef90	UniRef90_A0A2Z3EB40	Tail protein	NA
UHGV-0192706_29	eggNOG-mapper	10685.B6V2Q7_BPSP1	NA	NA
UHGV-0192706_29	Pfam	PF16075	NA	DUF4815
UHGV-0192706_29	Structural annotation	PF16075, PF18560, PF01833, PF00629, PF04721, TIGR03437, NF041539, COG3353	NA	NA
UHGV-0192706_35	eggNOG-mapper	657322.FPR_21910	NA	NA
UHGV-0192706_38	PHROG	phrog_36029	NA	unknown function
UHGV-0192706_38	UniRef90	UniRef90_A0A345BPS8	Holin of superfamily 6	NA
UHGV-0192706_38	eggNOG-mapper	1232449.BAHV02000016_gene1809	NA	NA
UHGV-0192706_39	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0192706_39	PHROG	phrog_7698	endolysin	lysis
UHGV-0192706_39	UniRef90	UniRef90_UPI0009C300BD	SPOR domain-containing protein	NA
UHGV-0192706_39	eggNOG-mapper	293826.Amet_2548	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0192706_39	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0192706_39	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-0192706_39	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0192706_39	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0192706_40	KOfam	K18959	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	NA
UHGV-0192706_40	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0192706_40	UniRef90	UniRef90_F8WQ09	DNA helicase	NA
UHGV-0192706_40	eggNOG-mapper	1391188.A0A068EU29_9CAUD	Type III restriction enzyme, res subunit	NA
UHGV-0192706_40	PADLOC	mREase_IV_00004	Type IV methyl-directed restriction enzyme	RM
UHGV-0192706_40	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0192706_40	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0192706_40	Structural annotation	PF04851, PF16203, MF_01489, TIGR04095, COG1061	NA	NA
UHGV-0192706_42	KOfam	K18947	gp41; DNA replication helicase [EC:5.6.2.3]	NA
UHGV-0192706_42	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0192706_42	UniRef90	UniRef90_S5MTC5	DNA helicase	NA
UHGV-0192706_42	eggNOG-mapper	1391188.A0A068EP85_9CAUD	DNA helicase activity	NA
UHGV-0192706_42	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0192706_42	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0192706_43	KOfam	K03547	sbcD, mre11; DNA repair protein SbcD/Mre11	NA
UHGV-0192706_43	PHROG	phrog_100	SbcD-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0192706_43	UniRef90	UniRef90_A0A7D3UHU3	Recombination exonuclease	NA
UHGV-0192706_43	eggNOG-mapper	1527469.A0A076G8Y3_9CAUD	hydrolase activity	NA
UHGV-0192706_43	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0192706_43	Structural annotation	PF14582, MF_02044, NF041031, COG0420	NA	NA
UHGV-0192706_44	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0192706_44	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0192706_44	UniRef90	UniRef90_A0A3G3BWQ5	Putative DNA double-strand break repair Rad50 ATPase	NA
UHGV-0192706_44	eggNOG-mapper	1527469.A0A076G7G7_9CAUD	N-acetyltransferase activity	NA
UHGV-0192706_44	Pfam	PF13476	AAA domain	AAA_23
UHGV-0192706_44	Pfam	PF13558	SbcC/RAD50-like, Walker B motif	SbcC_Walker_B
UHGV-0192706_44	Structural annotation	PF13166, MF_00449, NF002244, COG0419	NA	NA
UHGV-0192706_46	KOfam	K07699	spo0A; two-component system, response regulator, stage 0 sporulation protein A	NA
UHGV-0192706_46	PHROG	phrog_37855	NA	unknown function
UHGV-0192706_46	UniRef90	UniRef90_A0A358NK49	Sporulation transcription factor Spo0A (Fragment)	NA
UHGV-0192706_46	eggNOG-mapper	1444306.JFZC01000034_gene2578	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	NA
UHGV-0192706_46	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-0192706_46	COG	COG0745	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	NA
UHGV-0192706_47	KOfam	K02316	dnaG; DNA primase [EC:2.7.7.101]	NA
UHGV-0192706_47	PHROG	phrog_47	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0192706_47	UniRef90	UniRef90_A0A3G3BWG0	DNA primase	NA
UHGV-0192706_47	eggNOG-mapper	1572704.A0A0D3MWA0_9CAUD	CHC2 zinc finger	NA
UHGV-0192706_47	Pfam	PF01807	CHC2 zinc finger	zf-CHC2
UHGV-0192706_47	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0192706_47	Structural annotation	PF01807, PF13155, MF_00974, TIGR01391, COG0358	NA	NA
UHGV-0192706_48	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0192706_48	PHROG	phrog_314	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0192706_48	UniRef90	UniRef90_A0A6V7B5T8	Phage-associated homing endonuclease	NA
UHGV-0192706_48	eggNOG-mapper	1552123.EP57_14625	Deoxyuridine 5'-triphosphate	NA
UHGV-0192706_48	PADLOC	HEase_00005	homing endonuclease	RM
UHGV-0192706_48	Pfam	PF19835	Putative endonuclease segE, GIY-YIG domain	SegE_GIY-YIG
UHGV-0192706_48	Pfam	PF07460	NUMOD3 motif	NUMOD3
UHGV-0192706_48	Pfam	PF00692	dUTPase	dUTPase
UHGV-0192706_48	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0192706_50	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0192706_50	UniRef90	UniRef90_A0A142F1H6	Endonuclease-holliday junction resolvase-like protein	NA
UHGV-0192706_50	eggNOG-mapper	1572704.A0A0D3MVH5_9CAUD	NA	NA
UHGV-0192706_51	PHROG	phrog_13880	transcriptional regulator	transcription regulation
UHGV-0192706_55	UniRef90	UniRef90_A0A7D3UHY9	RNA polymerase sigma factor	NA
UHGV-0192706_56	PHROG	phrog_13400	NA	unknown function
UHGV-0192706_59	PHROG	phrog_800	terminase small subunit	head and packaging
UHGV-0192706_59	UniRef90	UniRef90_F8WQ30	aGPT-Pplase1 domain-containing protein	NA
UHGV-0192706_59	eggNOG-mapper	1262513.K7YIY0_9CAUD	kinase activity	NA
UHGV-0192706_59	Pfam	PF18748	5-hmdU DNA kinase	HMUDK_HMUD1
UHGV-0192706_59	Pfam	PF18723	5-hmdU DNA kinase, helical domain	HMUDK_hel
UHGV-0192706_60	KOfam	K03574	mutT, NUDT15, MTH2; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]	NA
UHGV-0192706_60	PHROG	phrog_1198	MutT/NUDIX hydrolase	other
UHGV-0192706_60	UniRef90	UniRef90_A0A4R5P3C1	Nucleoside triphosphatase NudI	NA
UHGV-0192706_60	eggNOG-mapper	908340.HMPREF9406_1130	Belongs to the Nudix hydrolase family	NA
UHGV-0192706_60	Pfam	PF00293	NUDIX domain	NUDIX
UHGV-0192706_60	COG	COG1051	ADP-ribose pyrophosphatase YjhB, NUDIX family	NA
UHGV-0192706_61	KOfam	K00560	thyA, TYMS; thymidylate synthase [EC:2.1.1.45]	NA
UHGV-0192706_61	PHROG	phrog_5131	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0192706_61	UniRef90	UniRef90_A0A7D3UEP4	Thymidylate synthase	NA
UHGV-0192706_61	eggNOG-mapper	10685.B6V2J2_BPSP1	Thymidylate synthase	NA
UHGV-0192706_61	Pfam	PF00303	Thymidylate synthase	Thymidylat_synt
UHGV-0192706_61	Pfam	PF11527	The ARF-like 2 binding protein BART	ARL2_Bind_BART
UHGV-0192706_62	KOfam	K08722	yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]	NA
UHGV-0192706_62	PHROG	phrog_7076	NA	unknown function
UHGV-0192706_62	UniRef90	UniRef90_A0A7J4L7M8	HD domain-containing protein	NA
UHGV-0192706_62	Pfam	PF12917	5'-deoxynucleotidase YfbR-like	YfbR-like
UHGV-0192706_62	COG	COG1896	5'-deoxynucleotidase YfbR and related HD superfamily hydrolases	NA
UHGV-0192706_63	PHROG	phrog_22490	replication protein	DNA, RNA and nucleotide metabolism
UHGV-0192706_63	eggNOG-mapper	56110.Oscil6304_4780	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	NA
UHGV-0192706_63	COG	COG0207	Thymidylate synthase	NA
UHGV-0192706_64	KOfam	K03530	hupB; DNA-binding protein HU-beta	NA
UHGV-0192706_64	PHROG	phrog_379	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0192706_64	UniRef90	UniRef90_A0A3G2NEL8	HU family DNA-binding protein	NA
UHGV-0192706_64	eggNOG-mapper	1207076.ALAT01000126_gene3176	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions	NA
UHGV-0192706_64	Pfam	PF00216	Bacterial DNA-binding protein	Bac_DNA_binding
UHGV-0192706_64	COG	COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	NA
UHGV-0192706_65	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0192706_65	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0192706_65	UniRef90	UniRef90_A0A7D3UIE5	DNA polymerase	NA
UHGV-0192706_65	eggNOG-mapper	10685.B6V2J7_BPSP1	DNA polymerase family A	NA
UHGV-0192706_65	Pfam	PF03167	Uracil DNA glycosylase superfamily	UDG
UHGV-0192706_65	Pfam	PF01612	3'-5' exonuclease	DNA_pol_A_exo1
UHGV-0192706_65	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0192706_66	UniRef90	UniRef90_A0A7D0J9X8	HNH endonuclease	NA
UHGV-0192706_66	eggNOG-mapper	1527519.A0A076G706_9CAUD	NA	NA
UHGV-0192706_67	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0192706_67	PHROG	phrog_5995	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0192706_67	UniRef90	UniRef90_U5PT39	DNA polymerase	NA
UHGV-0192706_67	eggNOG-mapper	10685.B6V2J7_BPSP1	DNA polymerase family A	NA
UHGV-0192706_67	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0192706_69	PHROG	phrog_1069	NA	unknown function
UHGV-0192706_69	eggNOG-mapper	40523.A8ASX3_BPA51	NA	NA
UHGV-0192706_70	PHROG	phrog_1192	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0192706_70	UniRef90	UniRef90_S5M976	gp32 domain-containing protein	NA
UHGV-0192706_70	eggNOG-mapper	1391188.A0A068EU54_9CAUD	gp32 DNA binding protein like	NA
UHGV-0192706_70	Pfam	PF08804	gp32 DNA binding protein like	gp32
UHGV-0192706_71	KOfam	K03553	recA; recombination protein RecA	NA
UHGV-0192706_71	PHROG	phrog_97	UvsX-like recombinase	other
UHGV-0192706_71	UniRef90	UniRef90_F8WQ39	RecA protein	NA
UHGV-0192706_71	eggNOG-mapper	1410622.JNKY01000002_gene1972	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	NA
UHGV-0192706_71	Pfam	PF00154	recA bacterial DNA recombination protein	RecA
UHGV-0192706_71	COG	COG0468	RecA/RadA recombinase	NA
UHGV-0192706_71	Structural annotation	PF00154, MF_00268, TIGR02012, COG0468	NA	NA
UHGV-0192706_72	KOfam	K18950	rnh; ribonuclease H [EC:3.1.26.4]	NA
UHGV-0192706_72	PHROG	phrog_107	RNaseH	DNA, RNA and nucleotide metabolism
UHGV-0192706_72	UniRef90	UniRef90_A0A7T3KIZ2	Ribonuclease H	NA
UHGV-0192706_72	eggNOG-mapper	1123503.KB908056_gene2184	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity	NA
UHGV-0192706_72	Pfam	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain	5_3_exonuc_N
UHGV-0192706_72	Pfam	PF01367	5'-3' exonuclease, C-terminal SAM fold	5_3_exonuc
UHGV-0192706_72	COG	COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	NA
UHGV-0192706_72	Structural annotation	PF02739, PF01367, MF_01192, NF011546, COG0258	NA	NA
UHGV-0192706_74	KOfam	K21636	nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]	NA
UHGV-0192706_74	PHROG	phrog_487	NrdD-like anaerobic ribonucleotide reductase large subunit	moron, auxiliary metabolic gene and host takeover
UHGV-0192706_74	UniRef90	UniRef90_UPI00164D1133	anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-0192706_74	eggNOG-mapper	246199.CUS_7762	Ribonucleoside-triphosphate reductase	NA
UHGV-0192706_74	Pfam	PF03477	ATP cone domain	ATP-cone
UHGV-0192706_74	Pfam	PF13597	Anaerobic ribonucleoside-triphosphate reductase	NRDD
UHGV-0192706_74	NCBIFam	NF006732.0	anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-0192706_74	COG	COG1327	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	NA
UHGV-0192706_74	Structural annotation	PF13597, PF03477, MF_00440, NF006732, COG1328	NA	NA
UHGV-0192706_75	KOfam	K04068	nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]	NA
UHGV-0192706_75	PHROG	phrog_626	anaerobic ribonucleotide reductase small subunit	DNA, RNA and nucleotide metabolism
UHGV-0192706_75	UniRef90	UniRef90_A0A379CI75	Anaerobic ribonucleoside-triphosphate reductase-activating protein	NA
UHGV-0192706_75	eggNOG-mapper	537007.BLAHAN_06625	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine	NA
UHGV-0192706_75	Pfam	PF13353	4Fe-4S single cluster domain	Fer4_12
UHGV-0192706_75	NCBIFam	TIGR02491.1	anaerobic ribonucleoside-triphosphate reductase activating protein	NA
UHGV-0192706_75	COG	COG0602	Organic radical activating enzyme NrdG/QueE	NA
UHGV-0192706_75	Structural annotation	PF13353, MF_00917, TIGR02491, COG0602	NA	NA
UHGV-0192706_76	KOfam	K18951	gp30; DNA ligase [EC:6.5.1.1]	NA
UHGV-0192706_76	PHROG	phrog_114	ATP-dependent DNA ligase	DNA, RNA and nucleotide metabolism
UHGV-0192706_76	UniRef90	UniRef90_A0A7T3N4F9	DNA ligase	NA
UHGV-0192706_76	eggNOG-mapper	10685.B6V2K8_BPSP1	DNA ligase (ATP) activity	NA
UHGV-0192706_76	Pfam	PF01068	ATP dependent DNA ligase domain	DNA_ligase_A_M
UHGV-0192706_76	Pfam	PF14743	DNA ligase OB-like domain	DNA_ligase_OB_2
UHGV-0192706_76	Structural annotation	PF01068, PF17879, MF_00407, NF002868, COG1793	NA	NA
UHGV-0192706_78	KOfam	K03091	sigH; RNA polymerase sporulation-specific sigma factor	NA
UHGV-0192706_78	PHROG	phrog_1025	RNA polymerase sigma factor	transcription regulation
UHGV-0192706_78	Pfam	PF04542	Sigma-70 region 2	Sigma70_r2
UHGV-0192706_81	eggNOG-mapper	1519439.JPJG01000051_gene732	nuclear chromosome segregation	NA
UHGV-0192706_81	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0192706_85	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0192706_86	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0192706_88	Structural annotation	PF01396	NA	NA
UHGV-0192706_92	PHROG	phrog_15303	NA	unknown function
UHGV-0192706_93	PHROG	phrog_1007	NA	unknown function
UHGV-0192706_93	eggNOG-mapper	442493.A8E2D3_BPPHE	NA	NA
UHGV-0192706_94	UniRef90	UniRef90_A0A385Q1M8	NA	NA
UHGV-0192706_94	eggNOG-mapper	936596.HMPREF1495_1699	NA	NA
UHGV-0192706_94	Pfam	PF07866	NA	DUF1653
UHGV-0192706_94	COG	COG4728	NA	NA
UHGV-0192706_97	PHROG	phrog_16724	NA	unknown function
UHGV-0192706_97	UniRef90	UniRef90_G3MBK2	Gp136	NA
UHGV-0192706_97	eggNOG-mapper	1084719.G3MBK2_9CAUD	endonuclease activity	NA
UHGV-0192706_103	PHROG	phrog_2776	NA	unknown function
UHGV-0192706_103	UniRef90	UniRef90_A0A8G1GGN1	Endonuclease	NA
UHGV-0192706_103	eggNOG-mapper	349161.Dred_0923	NA	NA
UHGV-0192706_106	Structural annotation	PF11184	NA	NA
UHGV-0192706_108	PHROG	phrog_4400	NA	unknown function
UHGV-0192706_108	eggNOG-mapper	1236976.JCM16418_4597	NA	NA
UHGV-0192706_108	dbAPIS	APIS008	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	NA
UHGV-0192706_110	Pfam	PF12760	Transposase zinc-ribbon domain	Zn_Tnp_IS1595
UHGV-0192706_117	PHROG	phrog_335	phosphatase	other
UHGV-0192706_117	UniRef90	UniRef90_UPI001F27F1A0	macro domain-containing protein	NA
UHGV-0192706_117	eggNOG-mapper	1122921.KB898186_gene4889	phosphatase homologous to the C-terminal domain of histone macroH2A1	NA
UHGV-0192706_117	PADLOC	darG	NA	NA
UHGV-0192706_117	COG	COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	NA
UHGV-0192706_117	Structural annotation	PF01661, MF_01205, NF001666, COG2110	NA	NA
UHGV-0192706_125	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0192706_125	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0192706_125	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0192706_125	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0192706_125	Structural annotation	PF01845, PF04218, NF007386, COG2337	NA	NA
UHGV-0192706_126	KOfam	K03090	sigB; RNA polymerase sigma-B factor	NA
UHGV-0192706_126	PHROG	phrog_351	RNA polymerase sigma factor	transcription regulation
UHGV-0192706_126	UniRef90	UniRef90_A0A0L6JT79	RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily	NA
UHGV-0192706_126	eggNOG-mapper	398512.JQKC01000005_gene5428	Sigma-70 region 2	NA
UHGV-0192706_126	Pfam	PF04542	Sigma-70 region 2	Sigma70_r2
UHGV-0192706_126	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0192706_126	Structural annotation	PF04542, PF06530, MF_00959, TIGR02980, COG1191	NA	NA
UHGV-0192706_136	KOfam	K07097	NA	NA
UHGV-0192706_136	PHROG	phrog_4771	DHH phosphoesterase	other
UHGV-0192706_136	UniRef90	UniRef90_A0A0U5B4T9	Oligoribonuclease NrnB	NA
UHGV-0192706_136	eggNOG-mapper	649747.HMPREF0083_01301	phosphohydrolase (DHH superfamily)	NA
UHGV-0192706_136	Pfam	PF02272	DHHA1 domain	DHHA1
UHGV-0192706_136	COG	COG2404	Oligoribonuclease NrnA/c-di-AMP phosphodiesterase DhhP, DHH superfamily	NA
UHGV-0192706_137	UniRef90	UniRef90_A0A497PJJ2	aGPT-Pplase2 domain-containing protein	NA
UHGV-0192706_137	Structural annotation	PF18724, NF009788	NA	NA
UHGV-0192706_138	PHROG	phrog_3271	NA	unknown function
UHGV-0192706_138	UniRef90	UniRef90_A0A6J5PI03	aGPT-Pplase2 domain-containing protein	NA
UHGV-0192706_138	eggNOG-mapper	637730.C8XUV8_9CAUD	NA	NA
UHGV-0192706_138	Pfam	PF18724	Amino acid:DNA transferase	ADDT
UHGV-0192706_138	Structural annotation	PF18724, NF009788	NA	NA
UHGV-0192706_139	KOfam	K21512	gpA; terminase, large subunit [EC:3.1.21.4]	NA
UHGV-0192706_139	PHROG	phrog_675	terminase large subunit	head and packaging
UHGV-0192706_139	UniRef90	UniRef90_S5MAY0	Terminase large subunit	NA
UHGV-0192706_139	eggNOG-mapper	1391188.A0A068EUA4_9CAUD	Phage terminase large subunit (GpA)	NA
UHGV-0192706_139	Pfam	PF05876	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
UHGV-0192706_139	Structural annotation	PF05876, PF20454, MF_04144, TIGR01547, COG5525	NA	NA
UHGV-0192706_140	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0192706_140	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0192706_140	UniRef90	UniRef90_UPI0005EAE38C	DEAD/DEAH box helicase	NA
UHGV-0192706_140	eggNOG-mapper	999411.HMPREF1092_03256	snf2 family	NA
UHGV-0192706_140	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-0192706_140	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0192706_140	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0192706_140	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0192706_141	PHROG	phrog_19917	NA	unknown function