| Genome information | |
|---|---|
| Genome ID | UHGV-0192825 |
| vOTU ID | vOTU-028426 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN06164742_a1_ct45853_vs1@linear@Siphoviridae__sp._cthNS1 |
| BioSample | NA |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 41.46% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 8 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.8591 |
| Virus hallmark genes (geNomad) | 10 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - plasmid or chromosomal |
| viralVerify score | 3.82 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 26,316 bps |
| GC content | 51.71% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 34 |
| CDS density | 93.25% |
| Average CDS length | 724.41 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |