| Genome information | |
|---|---|
| Genome ID | UHGV-0193249 |
| vOTU ID | vOTU-030110 |
| vOTU representative | Yes |
| Source dataset | CHVD |
| Original genome ID | SAMN09781727_a1_ct6230_vs1@Siphoviridae__sp._ctpBp1 |
| BioSample | SAMN09781727 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 49.37% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 12 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9526 |
| Virus hallmark genes (geNomad) | 5 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 20.76 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 40,643 bps |
| GC content | 50.50% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 49 |
| CDS density | 85.63% |
| Average CDS length | 717.06 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |