| Genome information | |
|---|---|
| Genome ID | UHGV-0193543 |
| vOTU ID | vOTU-015027 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN03418253_a1_ct312946_vs1@Siphoviridae__sp._ctq1y1 |
| BioSample | SAMN03418253 |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 62.49% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 27 |
| CheckV host markers | 3 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9654 |
| Virus hallmark genes (geNomad) | 8 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 16.56 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 142,212 bps |
| GC content | 37.67% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 131 |
| CDS density | 93.04% |
| Average CDS length | 1,011.94 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |