| Genome information | |
|---|---|
| Genome ID | UHGV-0193588 |
| vOTU ID | vOTU-020043 |
| vOTU representative | Yes |
| Source dataset | CHVD |
| Original genome ID | SAMN09781750_a1_ct52916_vs1@Siphoviridae__sp._ct41P1 |
| BioSample | SAMN09781750 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 38.67% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 13 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9392 |
| Virus hallmark genes (geNomad) | 9 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 21.64 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 22,774 bps |
| GC content | 43.17% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 29 |
| CDS density | 92.29% |
| Average CDS length | 728.69 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |