UHGV-0194185

Genome information

Genome length 31,688 bps

CDS count 48

Completeness 99.90% (high-quality)

geNomad score 0.9797

Prediction confidence Confident

Genome information
Genome ID	UHGV-0194185
vOTU ID	vOTU-011363
vOTU representative	Yes
Source dataset	CHVD
Original genome ID	SAMN00792021_a1_ct26992_vs1@linear@Myoviridae__sp._ctzm31
BioSample	NA
Country	China
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.90% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9797
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.86
Jumbo phage	No

Genome content
Genome length	31,688 bps
GC content	50.01%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	48
CDS density	89.19%
Average CDS length	592.81 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0194185_1	PHROG	phrog_1066	NA	unknown function
UHGV-0194185_1	eggNOG-mapper	1094508.Tsac_2428	NA	NA
UHGV-0194185_2	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0194185_2	UniRef90	UniRef90_A0A8J6TY49	Terminase large subunit	NA
UHGV-0194185_2	eggNOG-mapper	411471.SUBVAR_05848	large subunit	NA
UHGV-0194185_2	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0194185_2	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0194185_2	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0194185_2	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0194185_3	PHROG	phrog_12	portal protein	head and packaging
UHGV-0194185_3	UniRef90	UniRef90_A0A8J6PFS2	Phage portal protein	NA
UHGV-0194185_3	eggNOG-mapper	411471.SUBVAR_05850	Phage portal protein	NA
UHGV-0194185_3	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0194185_3	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0194185_3	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0194185_4	KOfam	K06904	NA	NA
UHGV-0194185_4	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0194185_4	UniRef90	UniRef90_A0A1V5IPN6	Caudovirus prohead protease	NA
UHGV-0194185_4	eggNOG-mapper	1203606.HMPREF1526_01338	Caudovirus prohead serine protease	NA
UHGV-0194185_4	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0194185_4	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0194185_4	COG	COG3740	Phage head maturation protease	NA
UHGV-0194185_4	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0194185_5	PHROG	phrog_10	major head protein	head and packaging
UHGV-0194185_5	UniRef90	UniRef90_UPI00073E62C9	phage major capsid protein	NA
UHGV-0194185_5	eggNOG-mapper	626523.GCWU000342_01025	Phage capsid family	NA
UHGV-0194185_5	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0194185_5	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0194185_5	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0194185_5	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0194185_6	eggNOG-mapper	476272.RUMHYD_02855	NA	NA
UHGV-0194185_7	PHROG	phrog_5223	neck protein	connector
UHGV-0194185_7	UniRef90	UniRef90_A0A8J6P3F9	Phage gp6-like head-tail connector protein	NA
UHGV-0194185_7	eggNOG-mapper	411471.SUBVAR_05853	NA	NA
UHGV-0194185_7	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0194185_7	Structural annotation	TIGR01560	NA	NA
UHGV-0194185_8	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0194185_8	UniRef90	UniRef90_A0A8J6P6R3	Phage head-tail adapter protein	NA
UHGV-0194185_8	eggNOG-mapper	411471.SUBVAR_05854	NA	NA
UHGV-0194185_8	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0194185_9	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0194185_9	UniRef90	UniRef90_UPI00073E355A	HK97 gp10 family phage protein	NA
UHGV-0194185_9	eggNOG-mapper	411471.SUBVAR_05855	NA	NA
UHGV-0194185_9	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0194185_9	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0194185_10	PHROG	phrog_78	tail terminator	connector
UHGV-0194185_10	UniRef90	UniRef90_U2SBX3	HTH merR-type domain-containing protein	NA
UHGV-0194185_10	eggNOG-mapper	1226322.HMPREF1545_00120	NA	NA
UHGV-0194185_10	Structural annotation	PF20765	NA	NA
UHGV-0194185_11	PHROG	phrog_88	major tail protein	tail
UHGV-0194185_11	UniRef90	UniRef90_A0A1C6H6F0	Phage major tail protein, phi13 family	NA
UHGV-0194185_11	eggNOG-mapper	1226322.HMPREF1545_00121	phage major tail protein, phi13 family	NA
UHGV-0194185_11	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0194185_11	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0194185_12	PHROG	phrog_709	NA	unknown function
UHGV-0194185_12	eggNOG-mapper	411471.SUBVAR_05858	NA	NA
UHGV-0194185_12	Structural annotation	PF11836	NA	NA
UHGV-0194185_13	PHROG	phrog_23464	NA	unknown function
UHGV-0194185_13	UniRef90	UniRef90_A0A1C6H5M9	Phage-related minor tail protein	NA
UHGV-0194185_13	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-0194185_13	Pfam	PF05017	TMP repeat	TMP
UHGV-0194185_13	COG	COG5412	Phage-related protein	NA
UHGV-0194185_13	Structural annotation	PF20155, TIGR01760, COG5280	NA	NA
UHGV-0194185_14	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0194185_14	UniRef90	UniRef90_A0A1C6H6D2	Phage-related protein	NA
UHGV-0194185_14	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-0194185_14	COG	COG4722	Phage-related protein YomH	NA
UHGV-0194185_14	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0194185_15	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-0194185_15	PHROG	phrog_3377	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0194185_15	eggNOG-mapper	1122925.KB895394_gene1703	HicB_like antitoxin of bacterial toxin-antitoxin system	NA
UHGV-0194185_15	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-0194185_15	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0194185_16	UniRef90	UniRef90_A0A350U007	DNA-binding protein	NA
UHGV-0194185_16	eggNOG-mapper	596315.HMPREF0634_0594	trisaccharide binding	NA
UHGV-0194185_16	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0194185_16	COG	COG2909	ATP-, maltotriose- and DNA-dependent transcriptional regulator MalT	NA
UHGV-0194185_17	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0194185_17	UniRef90	UniRef90_A0A316NPB5	Peptidase S74 domain-containing protein	NA
UHGV-0194185_17	eggNOG-mapper	1160721.RBI_I01574	Prophage endopeptidase tail	NA
UHGV-0194185_17	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0194185_17	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0194185_17	COG	COG4926	Phage-related protein	NA
UHGV-0194185_17	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0194185_18	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-0194185_18	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0194185_18	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0194185_19	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0194185_19	PHROG	phrog_15001	endolysin	lysis
UHGV-0194185_19	UniRef90	UniRef90_R6GU62	Sporulation domain-containing protein	NA
UHGV-0194185_19	eggNOG-mapper	552398.HMPREF0866_01156	Ami_2	NA
UHGV-0194185_19	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0194185_19	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0194185_20	PHROG	phrog_4105	NA	unknown function
UHGV-0194185_20	eggNOG-mapper	1291050.JAGE01000001_gene433	NA	NA
UHGV-0194185_21	PHROG	phrog_20258	NA	unknown function
UHGV-0194185_21	eggNOG-mapper	665956.HMPREF1032_02710	NA	NA
UHGV-0194185_22	PHROG	phrog_2158	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UHGV-0194185_22	UniRef90	UniRef90_A0A414IQT9	Abi family protein	NA
UHGV-0194185_22	eggNOG-mapper	742765.HMPREF9457_01317	Abi-like protein	NA
UHGV-0194185_22	PADLOC	AbiD	AbiD	Abi
UHGV-0194185_22	Pfam	PF07751	Abi-like protein	Abi_2
UHGV-0194185_22	COG	COG4823	Abortive infection bacteriophage resistance protein	NA
UHGV-0194185_22	Structural annotation	PF07751, COG4823	NA	NA
UHGV-0194185_24	eggNOG-mapper	537013.CLOSTMETH_01698	NA	NA
UHGV-0194185_26	PHROG	phrog_17486	NA	unknown function
UHGV-0194185_28	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0194185_30	eggNOG-mapper	563031.HMPREF0666_01114	NA	NA
UHGV-0194185_34	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0194185_34	UniRef90	UniRef90_A0A316RHU5	ATP-binding protein	NA
UHGV-0194185_34	eggNOG-mapper	754027.HMPREF9554_00709	NA	NA
UHGV-0194185_34	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0194185_35	PHROG	phrog_18107	NA	unknown function
UHGV-0194185_35	eggNOG-mapper	476272.RUMHYD_02831	NA	NA
UHGV-0194185_35	Structural annotation	PF05037	NA	NA
UHGV-0194185_36	PHROG	phrog_3490	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UHGV-0194185_36	UniRef90	UniRef90_R6N0P8	ERCC4 domain-containing protein	NA
UHGV-0194185_36	eggNOG-mapper	1304866.K413DRAFT_0825	resolution of meiotic recombination intermediates	NA
UHGV-0194185_36	Pfam	PF02732	ERCC4 domain	ERCC4
UHGV-0194185_36	COG	COG1948	ERCC4-type crossover junction endonuclease	NA
UHGV-0194185_36	Structural annotation	PF02732, NF040956, COG1948	NA	NA
UHGV-0194185_37	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0194185_37	eggNOG-mapper	665956.HMPREF1032_02617	Phage replisome organizer, N-terminal domain protein	NA
UHGV-0194185_37	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0194185_37	Structural annotation	PF10771, MF_01177, TIGR01714, COG5529	NA	NA
UHGV-0194185_38	KOfam	K17680	PEO1; twinkle protein [EC:5.6.2.3]	NA
UHGV-0194185_38	PHROG	phrog_239	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UHGV-0194185_38	UniRef90	UniRef90_R6P3P1	SF4 helicase domain-containing protein	NA
UHGV-0194185_38	eggNOG-mapper	1256908.HMPREF0373_00663	NA	NA
UHGV-0194185_38	Pfam	PF13481	AAA domain	AAA_25
UHGV-0194185_38	COG	COG0305	Replicative DNA helicase	NA
UHGV-0194185_38	Structural annotation	PF03796, PF19898, MF_04154, TIGR03877, TIGR01391, COG0467, COG0358	NA	NA
UHGV-0194185_40	PHROG	phrog_38832	NA	unknown function
UHGV-0194185_40	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0194185_40	Structural annotation	PF18300, MF_01549, NF008636, COG4568	NA	NA
UHGV-0194185_41	PHROG	phrog_986	RNA-binding protein	DNA, RNA and nucleotide metabolism
UHGV-0194185_41	UniRef90	UniRef90_A0A413DGU9	NA	NA
UHGV-0194185_41	eggNOG-mapper	1204534.J9QD24_9CAUD	NA	NA
UHGV-0194185_41	Pfam	PF12961	NA	DUF3850
UHGV-0194185_41	Structural annotation	PF12961, MF_00684, NF003443, COG4043	NA	NA
UHGV-0194185_43	PHROG	phrog_924	NA	unknown function
UHGV-0194185_43	UniRef90	UniRef90_A0A6C0R0N0	NA	NA
UHGV-0194185_43	Pfam	PF04448	NA	DUF551
UHGV-0194185_43	Structural annotation	NF041588	NA	NA
UHGV-0194185_48	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0194185_48	UniRef90	UniRef90_A0A6A8VJ07	NA	NA
UHGV-0194185_48	eggNOG-mapper	748727.CLJU_c03460	sigma factor activity	NA
UHGV-0194185_48	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0194185_48	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA