| Genome information | |
|---|---|
| Genome ID | UHGV-0194212 |
| vOTU ID | vOTU-003321 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781730_a1_ct75203_vs1@Siphoviridae__sp._ctXco1 |
| BioSample | SAMN09781730 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 77.80% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 31 |
| CheckV host markers | 4 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9542 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 49.68 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 91,515 bps |
| GC content | 48.92% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 116 |
| CDS density | 92.45% |
| Average CDS length | 732.49 bps |
| tRNA count | 5 |
| Suppressor tRNA genes | 0 |