| Genome information | |
|---|---|
| Genome ID | UHGV-0194773 |
| vOTU ID | vOTU-015904 |
| vOTU representative | Yes |
| Source dataset | CHVD |
| Original genome ID | SAMN09781713_a1_ct20358_vs1@Siphoviridae__sp._ctiq51 |
| BioSample | SAMN09781713 |
| Country | Madagascar |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 73.47% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 5 |
| CheckV host markers | 4 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9674 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Plasmid |
| viralVerify score | 19.47 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 30,902 bps |
| GC content | 52.88% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 35 |
| CDS density | 96.83% |
| Average CDS length | 858.26 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |