| Genome information | |
|---|---|
| Genome ID | UHGV-0195022 |
| vOTU ID | vOTU-008284 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781725_a1_ct82541_vs2@Siphoviridae__sp._ctGUt2 |
| BioSample | SAMN09781725 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 71.06% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 21 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9768 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 5.03 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 44,381 bps |
| GC content | 36.81% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 68 |
| CDS density | 89.53% |
| Average CDS length | 585.66 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |