| Genome information | |
|---|---|
| Genome ID | UHGV-0196038 |
| vOTU ID | vOTU-060450 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781743_a1_ct136785_vs1@Unclassified_virus__sp._ctLGp1 |
| BioSample | SAMN09781743 |
| Country | Madagascar |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 33.52% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 1 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9799 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 3.35 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 15,294 bps |
| GC content | 39.39% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 14 |
| CDS density | 97.70% |
| Average CDS length | 1,069.50 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |