| Genome information | |
|---|---|
| Genome ID | UHGV-0196079 |
| vOTU ID | vOTU-024651 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN03418270_a1_ct13377_vs1@Podoviridae__sp._ctecC1 |
| BioSample | SAMN03418270 |
| Country | Tanzania |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 42.62% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 6 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9770 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 13.22 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 13,822 bps |
| GC content | 45.05% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 16 |
| CDS density | 93.23% |
| Average CDS length | 809.81 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |