| Genome information | |
|---|---|
| Genome ID | UHGV-0196539 |
| vOTU ID | vOTU-017455 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN06165000_a1_ct81775_vs1@linear@Siphoviridae__sp._ctLo11 |
| BioSample | SAMN06165000 |
| Country | United States |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 48.59% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 11 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9664 |
| Virus hallmark genes (geNomad) | 9 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | -6.62 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 32,641 bps |
| GC content | 49.70% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 53 |
| CDS density | 92.24% |
| Average CDS length | 571.08 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |