| Genome information | |
|---|---|
| Genome ID | UHGV-0197128 |
| vOTU ID | vOTU-016395 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN00792073_a1_ct6004_vs1@linear@Siphoviridae__sp._ctLkr1 |
| BioSample | SAMN00792073 |
| Country | China |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 29.28% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 11 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9747 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | -0.58 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 52,075 bps |
| GC content | 52.32% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 56 |
| CDS density | 91.54% |
| Average CDS length | 852.38 bps |
| tRNA count | 2 |
| Suppressor tRNA genes | 0 |