| Genome information | |
|---|---|
| Genome ID | UHGV-0197543 |
| vOTU ID | vOTU-029163 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781726_a1_ct79660_vs1@Siphoviridae__sp._ctDXM1 |
| BioSample | SAMN09781726 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 35.31% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 2 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9814 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 2 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 28,938 bps |
| GC content | 40.32% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 28 |
| CDS density | 91.35% |
| Average CDS length | 944.57 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |