UHGV-0197702

Genome information

vOTU vOTU-020107

Genome length 25,892 bps

CDS count 32

Completeness 57.44% (medium-quality)

geNomad score 0.9803

Prediction confidence Confident

Genome information
Genome ID	UHGV-0197702
vOTU ID	vOTU-020107
vOTU representative	Yes
Source dataset	CHVD
Original genome ID	SAMN05414933_a1_ct125088_vs1@Unclassified_virus__sp._ct4tZ1
BioSample	SAMN05414933
Country	Mongolia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.44% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9803
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	12.32
Jumbo phage	No

Genome content
Genome length	25,892 bps
GC content	43.34%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	32
CDS density	91.46%
Average CDS length	741.66 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0197702_2	KOfam	K07705	lytT, lytR; two-component system, LytTR family, response regulator LytT	NA
UHGV-0197702_2	PHROG	phrog_8810	NA	unknown function
UHGV-0197702_2	UniRef90	UniRef90_UPI001D0E4226	LytTR family DNA-binding domain-containing protein	NA
UHGV-0197702_2	eggNOG-mapper	556261.HMPREF0240_03082	response regulator	NA
UHGV-0197702_2	Pfam	PF00072	Response regulator receiver domain	Response_reg
UHGV-0197702_2	Pfam	PF04397	LytTr DNA-binding domain	LytTR
UHGV-0197702_2	COG	COG3279	DNA-binding response regulator, LytR/AlgR family	NA
UHGV-0197702_2	Structural annotation	PF04397, PF00072, MF_00981, NF010684, COG3279	NA	NA
UHGV-0197702_3	PHROG	phrog_8545	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UHGV-0197702_3	UniRef90	UniRef90_UPI001C0EAFDF	OB-fold putative lipoprotein	NA
UHGV-0197702_3	eggNOG-mapper	1304866.K413DRAFT_0836	tRNA_anti-like	NA
UHGV-0197702_3	Pfam	PF12869	tRNA_anti-like	tRNA_anti-like
UHGV-0197702_3	Structural annotation	PF12869, PF10571, MF_01959, TIGR03943, COG5235	NA	NA
UHGV-0197702_4	KOfam	K14059	int; integrase	NA
UHGV-0197702_4	PHROG	phrog_1	integrase	integration and excision
UHGV-0197702_4	UniRef90	UniRef90_D4LPN8	Phage integrase family	NA
UHGV-0197702_4	eggNOG-mapper	1235792.C808_05256	Belongs to the 'phage' integrase family	NA
UHGV-0197702_4	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0197702_4	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0197702_4	Structural annotation	PF00589, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0197702_5	KOfam	K07273	acm; lysozyme	NA
UHGV-0197702_5	PHROG	phrog_291	endolysin	lysis
UHGV-0197702_5	UniRef90	UniRef90_A0A317UBE2	PG_binding_1 domain-containing protein	NA
UHGV-0197702_5	eggNOG-mapper	476272.RUMHYD_02876	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	NA
UHGV-0197702_5	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0197702_5	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0197702_5	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0197702_5	Structural annotation	PF01183, TIGR02594, TIGR04303, COG3757, COG3942	NA	NA
UHGV-0197702_6	PHROG	phrog_6616	tail protein	tail
UHGV-0197702_6	UniRef90	UniRef90_UPI001D0E203F	tail fiber domain-containing protein	NA
UHGV-0197702_6	eggNOG-mapper	33035.JPJF01000043_gene1002	NA	NA
UHGV-0197702_6	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0197702_6	Structural annotation	PF05113, PF18432, NF033848, NF011735, COG4379	NA	NA
UHGV-0197702_7	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0197702_8	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0197702_8	UniRef90	UniRef90_A0A173R880	Phage-related protein	NA
UHGV-0197702_8	eggNOG-mapper	476272.RUMHYD_01785	phage tail tape measure protein	NA
UHGV-0197702_8	COG	COG1511	NA	NA
UHGV-0197702_8	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0197702_9	PHROG	phrog_706	NA	unknown function
UHGV-0197702_9	UniRef90	UniRef90_UPI001BAD00AD	Gp15 family bacteriophage protein	NA
UHGV-0197702_9	eggNOG-mapper	411459.RUMOBE_01383	Bacteriophage Gp15 protein	NA
UHGV-0197702_9	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0197702_9	Structural annotation	PF06854	NA	NA
UHGV-0197702_10	PHROG	phrog_11299	NA	unknown function
UHGV-0197702_10	eggNOG-mapper	33035.JPJF01000106_gene3125	NA	NA
UHGV-0197702_10	Structural annotation	PF10666	NA	NA
UHGV-0197702_11	PHROG	phrog_3099	NA	unknown function
UHGV-0197702_11	eggNOG-mapper	411902.CLOBOL_00129	NA	NA
UHGV-0197702_11	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0197702_12	PHROG	phrog_3266	tail completion	connector
UHGV-0197702_12	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-0197702_12	Structural annotation	PF12691	NA	NA
UHGV-0197702_13	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0197702_13	UniRef90	UniRef90_UPI000E4989EB	minor capsid protein	NA
UHGV-0197702_13	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-0197702_13	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0197702_13	Structural annotation	PF11114	NA	NA
UHGV-0197702_14	PHROG	phrog_3366	NA	unknown function
UHGV-0197702_14	eggNOG-mapper	476272.RUMHYD_01779	NA	NA
UHGV-0197702_14	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0197702_15	PHROG	phrog_18218	NA	unknown function
UHGV-0197702_15	UniRef90	UniRef90_A0A8D9PGR5	Holin	NA
UHGV-0197702_15	eggNOG-mapper	411902.CLOBOL_03424	NA	NA
UHGV-0197702_15	Structural annotation	PF06946	NA	NA
UHGV-0197702_16	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0197702_16	UniRef90	UniRef90_A0A415G5B2	NA	NA
UHGV-0197702_16	eggNOG-mapper	397290.C810_05229	NA	NA
UHGV-0197702_16	Structural annotation	PF14359	NA	NA
UHGV-0197702_18	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0197702_18	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-0197702_19	PHROG	phrog_544	major head protein	head and packaging
UHGV-0197702_19	UniRef90	UniRef90_A0A395X7A1	S-l_SbsC_C domain-containing protein	NA
UHGV-0197702_19	eggNOG-mapper	1232453.BAIF02000011_gene3359	NA	NA
UHGV-0197702_19	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0197702_19	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0197702_20	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0197702_20	UniRef90	UniRef90_UPI001D14C9C8	phage scaffolding protein	NA
UHGV-0197702_20	eggNOG-mapper	476272.RUMHYD_01775	COG NOG36366 non supervised orthologous group	NA
UHGV-0197702_20	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0197702_22	PHROG	phrog_28802	NA	unknown function
UHGV-0197702_22	eggNOG-mapper	476272.RUMHYD_01772	NA	NA
UHGV-0197702_23	PHROG	phrog_20016	NA	unknown function
UHGV-0197702_23	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0197702_23	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-0197702_23	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0197702_24	PHROG	phrog_16490	NA	unknown function
UHGV-0197702_24	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0197702_25	PHROG	phrog_22984	NA	unknown function
UHGV-0197702_26	PHROG	phrog_21718	NA	unknown function
UHGV-0197702_26	eggNOG-mapper	476272.RUMHYD_01768	NA	NA
UHGV-0197702_27	eggNOG-mapper	411470.RUMGNA_03785	NA	NA
UHGV-0197702_27	AcrCatalog	cluster_81672	NA	NA
UHGV-0197702_28	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-0197702_28	eggNOG-mapper	1410625.JHWK01000002_gene45	Helix-turn-helix XRE-family like proteins	NA
UHGV-0197702_28	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0197702_28	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0197702_28	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-0197702_29	UniRef90	UniRef90_A0A395X7A4	CTP synthase	NA
UHGV-0197702_29	eggNOG-mapper	476272.RUMHYD_01766	NA	NA
UHGV-0197702_30	PHROG	phrog_3754	NA	unknown function
UHGV-0197702_30	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-0197702_31	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0197702_31	UniRef90	UniRef90_A0A395X791	Phage capsid protein	NA
UHGV-0197702_31	eggNOG-mapper	476272.RUMHYD_01761	Phage minor capsid protein 2	NA
UHGV-0197702_31	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0197702_31	COG	COG2369	NA	NA
UHGV-0197702_31	Structural annotation	PF06152	NA	NA
UHGV-0197702_32	PHROG	phrog_533	portal protein	head and packaging
UHGV-0197702_32	UniRef90	UniRef90_A0A1C6CDM8	Phage portal protein, putative, A118 family	NA
UHGV-0197702_32	eggNOG-mapper	33035.JPJF01000106_gene3135	phage minor capsid protein	NA
UHGV-0197702_32	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA