| Genome information | |
|---|---|
| Genome ID | UHGV-0198521 |
| vOTU ID | vOTU-017628 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN06164514_a1_ct35146_vs1@linear@Siphoviridae__sp._ctswC1 |
| BioSample | SAMN06164514 |
| Country | United States |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 55.14% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 13 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.8313 |
| Virus hallmark genes (geNomad) | 10 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 17.91 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 36,227 bps |
| GC content | 53.17% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 41 |
| CDS density | 91.48% |
| Average CDS length | 810.44 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |