| Genome information | |
|---|---|
| Genome ID | UHGV-0200002 |
| vOTU ID | vOTU-049689 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN00792083_a1_ct17786_vs1@linear@Siphoviridae__sp._ctAPA1 |
| BioSample | SAMN00792083 |
| Country | China |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 84.36% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | Yes |
| CheckV viral markers | 20 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9798 |
| Virus hallmark genes (geNomad) | 12 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 41.99 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 37,815 bps |
| GC content | 46.52% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 66 |
| CDS density | 92.69% |
| Average CDS length | 535.09 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |