| Genome information | |
|---|---|
| Genome ID | UHGV-0200923 |
| vOTU ID | vOTU-030510 |
| vOTU representative | Yes |
| Source dataset | CHVD |
| Original genome ID | SAMN06164654_a1_ct35224_vs1@linear@Siphoviridae__sp._ctShq1 |
| BioSample | SAMN06164654 |
| Country | United States |
| Virus prediction confidence | Uncertain |
| Quality assessment | |
|---|---|
| CheckV method | HMM-based |
| CheckV completeness | 35.54% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 4 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9359 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 10.47 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 26,150 bps |
| GC content | 50.20% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 39 |
| CDS density | 92.88% |
| Average CDS length | 627.46 bps |
| tRNA count | 1 |
| Suppressor tRNA genes | 0 |