| Genome information | |
|---|---|
| Genome ID | UHGV-0203173 |
| vOTU ID | vOTU-042528 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781785_a1_ct225569_vs1@Podoviridae__sp._ctL1a1 |
| BioSample | SAMN09781785 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 71.29% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 3 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9786 |
| Virus hallmark genes (geNomad) | 5 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 4.78 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 29,705 bps |
| GC content | 57.57% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 33 |
| CDS density | 93.47% |
| Average CDS length | 843.36 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |