| Genome information | |
|---|---|
| Genome ID | UHGV-0207072 |
| vOTU ID | vOTU-018335 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781781_a1_ct186245_vs1@Siphoviridae__sp._ctSqD1 |
| BioSample | SAMN09781781 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 27.68% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 15 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9800 |
| Virus hallmark genes (geNomad) | 2 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 12.33 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 35,784 bps |
| GC content | 37.32% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 45 |
| CDS density | 89.59% |
| Average CDS length | 714.13 bps |
| tRNA count | 8 |
| Suppressor tRNA genes | 0 |