| Genome information | |
|---|---|
| Genome ID | UHGV-0209642 |
| vOTU ID | vOTU-012242 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781763_a1_ct56227_vs1@Siphoviridae__sp._ctRck1 |
| BioSample | SAMN09781763 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 43.38% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 6 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9704 |
| Virus hallmark genes (geNomad) | 4 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 35.81 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 16,889 bps |
| GC content | 46.75% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 30 |
| CDS density | 86.42% |
| Average CDS length | 488.00 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |