UHGV-0209973

Genome information

Genome length 21,200 bps

CDS count 22

Completeness 53.70% (medium-quality)

geNomad score 0.9609

Prediction confidence Confident

Genome information
Genome ID	UHGV-0209973
vOTU ID	vOTU-023475
vOTU representative	Yes
Source dataset	CHVD
Original genome ID	SRS018541_a1_ct12030_vs01@Caudovirales__sp._ctfBn119@linear
BioSample	SAMN00039759
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.70% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9609
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	15.83
Jumbo phage	No

Genome content
Genome length	21,200 bps
GC content	61.22%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	22
CDS density	93.82%
Average CDS length	906.82 bps
tRNA count	2
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209973_1	PHROG	phrog_2546	NA	unknown function
UHGV-0209973_1	eggNOG-mapper	768710.DesyoDRAFT_5205	PFAM Tellurite resistance protein TerB	NA
UHGV-0209973_1	COG	COG3793	Tellurite resistance protein TerB	NA
UHGV-0209973_1	Structural annotation	PF13240	NA	NA
UHGV-0209973_2	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0209973_2	eggNOG-mapper	1226322.HMPREF1545_00059	tape measure	NA
UHGV-0209973_2	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0209973_2	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0209973_3	PHROG	phrog_1194	NA	unknown function
UHGV-0209973_3	eggNOG-mapper	665956.HMPREF1032_03629	NA	NA
UHGV-0209973_3	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0209973_4	PHROG	phrog_13879	NA	unknown function
UHGV-0209973_4	eggNOG-mapper	665956.HMPREF1032_03055	NA	NA
UHGV-0209973_5	PHROG	phrog_2163	virion structural protein	head and packaging
UHGV-0209973_5	UniRef90	UniRef90_A0A1Y3RZJ7	Peptidase S74 domain-containing protein	NA
UHGV-0209973_5	eggNOG-mapper	33035.JPJF01000033_gene2261	tail collar domain protein	NA
UHGV-0209973_5	COG	COG4675	Phage tail collar domain	NA
UHGV-0209973_6	PHROG	phrog_19111	NA	unknown function
UHGV-0209973_6	eggNOG-mapper	1232443.BAIA02000078_gene14	nuclear chromosome segregation	NA
UHGV-0209973_6	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0209973_7	eggNOG-mapper	665956.HMPREF1032_02705	NA	NA
UHGV-0209973_8	eggNOG-mapper	1232443.BAIA02000078_gene14	nuclear chromosome segregation	NA
UHGV-0209973_8	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0209973_9	eggNOG-mapper	411471.SUBVAR_06989	NA	NA
UHGV-0209973_9	Structural annotation	PF12691	NA	NA
UHGV-0209973_10	PHROG	phrog_820	major tail protein	tail
UHGV-0209973_10	UniRef90	UniRef90_A0A174M1L1	S-l_SbsC_C domain-containing protein	NA
UHGV-0209973_10	eggNOG-mapper	411471.SUBVAR_06988	NA	NA
UHGV-0209973_10	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0209973_11	PHROG	phrog_4450	NA	unknown function
UHGV-0209973_11	eggNOG-mapper	1540257.JQMW01000013_gene735	NA	NA
UHGV-0209973_11	Pfam	PF20378	NA	DUF6673
UHGV-0209973_11	Structural annotation	PF20378	NA	NA
UHGV-0209973_12	PHROG	phrog_706	NA	unknown function
UHGV-0209973_12	UniRef90	UniRef90_A0A6N3F5V9	Bacteriophage Gp15 protein	NA
UHGV-0209973_12	eggNOG-mapper	411471.SUBVAR_06986	Bacteriophage Gp15 protein	NA
UHGV-0209973_12	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0209973_12	Structural annotation	PF06854	NA	NA
UHGV-0209973_13	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-0209973_13	UniRef90	UniRef90_A0A6N3F627	TMP_3 domain-containing protein	NA
UHGV-0209973_13	eggNOG-mapper	665956.HMPREF1032_02942	Phage tail tape measure protein TP901	NA
UHGV-0209973_13	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0209973_14	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0209973_14	UniRef90	UniRef90_A0A8J6IR89	Phage tail family protein	NA
UHGV-0209973_14	eggNOG-mapper	1321782.HMPREF1986_02277	PFAM Phage tail protein	NA
UHGV-0209973_14	COG	COG4722	Phage-related protein YomH	NA
UHGV-0209973_14	Structural annotation	PF16774, PF21766, TIGR01633, COG4722	NA	NA
UHGV-0209973_15	PHROG	phrog_538	minor tail protein	tail
UHGV-0209973_15	UniRef90	UniRef90_A0A8J6IQQ3	Siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0209973_15	eggNOG-mapper	428125.CLOLEP_01424	NA	NA
UHGV-0209973_15	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0209973_15	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0209973_16	PHROG	phrog_1220	head protein	head and packaging
UHGV-0209973_16	UniRef90	UniRef90_A0A0E0TFT0	Phage-related putative tail protein	NA
UHGV-0209973_16	eggNOG-mapper	936375.HMPREF1152_1087	NA	NA
UHGV-0209973_16	Structural annotation	PF20747	NA	NA
UHGV-0209973_19	KOfam	K07273	acm; lysozyme	NA
UHGV-0209973_19	PHROG	phrog_291	endolysin	lysis
UHGV-0209973_19	UniRef90	UniRef90_A0A4R1QMG5	Glycosyl hydrolase family 25	NA
UHGV-0209973_19	eggNOG-mapper	665956.HMPREF1032_02177	hydrolase, family 25	NA
UHGV-0209973_19	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0209973_19	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0209973_20	PHROG	phrog_1129	holin	lysis
UHGV-0209973_20	UniRef90	UniRef90_UPI00164CD48B	phage holin family protein	NA
UHGV-0209973_20	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0209973_20	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0209973_20	Structural annotation	PF06946	NA	NA
UHGV-0209973_21	KOfam	K03783	punA, PNP; purine-nucleoside phosphorylase [EC:2.4.2.1]	NA
UHGV-0209973_21	UniRef90	UniRef90_R5N0H6	Purine nucleoside phosphorylase	NA
UHGV-0209973_21	eggNOG-mapper	1235835.C814_01753	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate	NA
UHGV-0209973_21	Pfam	PF01048	Phosphorylase superfamily	PNP_UDP_1
UHGV-0209973_21	NCBIFam	NF006054.0	purine-nucleoside phosphorylase	NA
UHGV-0209973_21	COG	COG0005	Purine nucleoside phosphorylase	NA
UHGV-0209973_22	UniRef90	UniRef90_A0A847Z7Q9	Amidohydrolase	NA
UHGV-0209973_22	eggNOG-mapper	1121866.AUGK01000003_gene1357	Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine	NA
UHGV-0209973_22	COG	COG0402	Cytosine/adenosine deaminase or related metal-dependent hydrolase	NA