| Genome information | |
|---|---|
| Genome ID | UHGV-0211136 |
| vOTU ID | vOTU-028583 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781787_a1_ct113893_vs1@Siphoviridae__sp._ctsHg1 |
| BioSample | SAMN09781787 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 40.40% (low-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 4 |
| CheckV host markers | 1 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9796 |
| Virus hallmark genes (geNomad) | 3 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Uncertain - viral or bacterial |
| viralVerify score | 2.01 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 18,242 bps |
| GC content | 41.12% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 25 |
| CDS density | 90.54% |
| Average CDS length | 662.76 bps |
| tRNA count | 0 |
| Suppressor tRNA genes | 0 |