| Genome information | |
|---|---|
| Genome ID | UHGV-0213355 |
| vOTU ID | vOTU-054223 |
| vOTU representative | No |
| Source dataset | CHVD |
| Original genome ID | SAMN09781774_a1_ct97341_vs1@Siphoviridae__sp._ctLs21 |
| BioSample | SAMN09781774 |
| Country | Madagascar |
| Virus prediction confidence | Confident |
| Quality assessment | |
|---|---|
| CheckV method | AAI-based |
| CheckV completeness | 54.15% (medium-quality) |
| CheckV contamination | 0.00% |
| Trimmed provirus | No |
| CheckV viral markers | 14 |
| CheckV host markers | 0 |
| Recoded stop codon | No |
| Viral signal | |
|---|---|
| geNomad score | 0.9796 |
| Virus hallmark genes (geNomad) | 10 |
| Plasmid hallmark genes (geNomad) | 0 |
| viralVerify prediction | Virus |
| viralVerify score | 29.66 |
| Jumbo phage | No |
| Genome content | |
|---|---|
| Genome length | 27,867 bps |
| GC content | 32.86% |
| Genetic code | The standard bacterial, archaeal and plant plastid code (11) |
| CDS count | 46 |
| CDS density | 91.62% |
| Average CDS length | 558.26 bps |
| tRNA count | 2 |
| Suppressor tRNA genes | 0 |