UHGV-0243156

Genome information

Genome length 34,581 bps

CDS count 49

Completeness 82.87% (medium-quality)

geNomad score 0.9809

Prediction confidence Confident

Genome information
Genome ID	UHGV-0243156
vOTU ID	vOTU-031361
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k141_2129_round8-12~933609
BioSample	NA
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.87% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9809
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.28
Jumbo phage	No

Genome content
Genome length	34,581 bps
GC content	47.48%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	49
CDS density	96.46%
Average CDS length	682.96 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0243156_1	UniRef90	UniRef90_UPI001F05C666	C40 family peptidase	NA
UHGV-0243156_1	eggNOG-mapper	394503.Ccel_3272	NLP P60 protein	NA
UHGV-0243156_1	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0243156_5	eggNOG-mapper	1408428.JNJP01000079_gene3365	Phage tail-collar fibre protein	NA
UHGV-0243156_5	COG	COG4675	Phage tail collar domain	NA
UHGV-0243156_6	PHROG	phrog_24103	NA	unknown function
UHGV-0243156_6	eggNOG-mapper	1118055.CAGU01000013_gene761	NA	NA
UHGV-0243156_8	Structural annotation	PF10651, NF038186	NA	NA
UHGV-0243156_9	PHROG	phrog_1220	head protein	head and packaging
UHGV-0243156_9	eggNOG-mapper	1321782.HMPREF1986_02279	COG NOG18825 non supervised orthologous group	NA
UHGV-0243156_10	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0243156_10	PHROG	phrog_3088	amidase	lysis
UHGV-0243156_10	UniRef90	UniRef90_A0A412G492	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0243156_10	eggNOG-mapper	198094.BA_4073	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0243156_10	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0243156_10	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0243156_10	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0243156_11	PHROG	phrog_538	minor tail protein	tail
UHGV-0243156_11	UniRef90	UniRef90_A0A1T4LS73	Virus ReqiPepy6 Gp37-like protein	NA
UHGV-0243156_11	eggNOG-mapper	1321782.HMPREF1986_02278	NA	NA
UHGV-0243156_11	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0243156_11	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0243156_12	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0243156_12	UniRef90	UniRef90_A0A412G4B4	Phage tail family protein	NA
UHGV-0243156_12	eggNOG-mapper	1321782.HMPREF1986_02277	PFAM Phage tail protein	NA
UHGV-0243156_12	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0243156_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-0243156_12	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0243156_13	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0243156_13	UniRef90	UniRef90_A0A412G4M4	Phage tail tape measure protein	NA
UHGV-0243156_13	eggNOG-mapper	411490.ANACAC_00710	Phage tail tape measure protein, TP901 family	NA
UHGV-0243156_13	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0243156_13	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0243156_13	COG	COG5283	Phage-related tail protein	NA
UHGV-0243156_13	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0243156_14	PHROG	phrog_706	NA	unknown function
UHGV-0243156_14	UniRef90	UniRef90_T3DQL6	Bacteriophage Gp15 family protein	NA
UHGV-0243156_14	eggNOG-mapper	1151292.QEW_4528	Bacteriophage Gp15 protein	NA
UHGV-0243156_14	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0243156_14	Structural annotation	PF06854	NA	NA
UHGV-0243156_16	PHROG	phrog_3099	NA	unknown function
UHGV-0243156_16	eggNOG-mapper	573061.Clocel_3536	NA	NA
UHGV-0243156_16	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0243156_17	PHROG	phrog_3266	tail completion	connector
UHGV-0243156_17	Structural annotation	PF12691	NA	NA
UHGV-0243156_18	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0243156_18	UniRef90	UniRef90_UPI0014302C23	minor capsid protein	NA
UHGV-0243156_18	eggNOG-mapper	642492.Clole_0824	Minor capsid protein	NA
UHGV-0243156_18	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0243156_18	Structural annotation	PF11114	NA	NA
UHGV-0243156_21	PHROG	phrog_10	major head protein	head and packaging
UHGV-0243156_21	UniRef90	UniRef90_A0A412G4B2	Phage major capsid protein	NA
UHGV-0243156_21	eggNOG-mapper	999413.HMPREF1094_00215	Phage capsid family	NA
UHGV-0243156_21	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0243156_21	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0243156_21	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0243156_21	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0243156_22	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0243156_22	UniRef90	UniRef90_UPI001D040840	phage scaffolding protein	NA
UHGV-0243156_22	eggNOG-mapper	999413.HMPREF1094_00216	COG NOG36366 non supervised orthologous group	NA
UHGV-0243156_22	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0243156_22	Structural annotation	PF06810	NA	NA
UHGV-0243156_23	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0243156_23	UniRef90	UniRef90_UPI001D07CE98	phage minor capsid protein	NA
UHGV-0243156_23	eggNOG-mapper	552396.HMPREF0863_00280	Phage minor capsid protein 2	NA
UHGV-0243156_23	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0243156_23	COG	COG2369	NA	NA
UHGV-0243156_23	Structural annotation	PF06152, PF18451	NA	NA
UHGV-0243156_24	PHROG	phrog_533	portal protein	head and packaging
UHGV-0243156_24	UniRef90	UniRef90_A0A412G4C1	Phage portal protein	NA
UHGV-0243156_24	eggNOG-mapper	999413.HMPREF1094_00220	phage minor capsid protein	NA
UHGV-0243156_24	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0243156_24	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0243156_25	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0243156_25	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0243156_25	UniRef90	UniRef90_A0A412G479	PBSX family phage terminase large subunit	NA
UHGV-0243156_25	eggNOG-mapper	999413.HMPREF1094_00221	Phage terminase, large subunit, PBSX family	NA
UHGV-0243156_25	COG	COG1783	Phage terminase large subunit	NA
UHGV-0243156_25	Structural annotation	PF04466, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0243156_26	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-0243156_26	UniRef90	UniRef90_A0A412G4C2	Terminase	NA
UHGV-0243156_26	eggNOG-mapper	1232449.BAHV02000008_gene626	DNA packaging	NA
UHGV-0243156_26	Pfam	PF06056	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
UHGV-0243156_26	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0243156_26	COG	COG5484	NA	NA
UHGV-0243156_26	Structural annotation	NF040601, COG5484	NA	NA
UHGV-0243156_27	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0243156_27	UniRef90	UniRef90_UPI00093217BF	sigma-70 family RNA polymerase sigma factor	NA
UHGV-0243156_27	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0243156_27	Structural annotation	PF04545, TIGR01636	NA	NA
UHGV-0243156_28	PHROG	phrog_24386	NA	unknown function
UHGV-0243156_28	eggNOG-mapper	511680.BUTYVIB_00647	COG NOG28949 non supervised orthologous group	NA
UHGV-0243156_28	COG	COG0241	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	NA
UHGV-0243156_32	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0243156_32	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0243156_32	UniRef90	UniRef90_UPI000933F83B	site-specific DNA-methyltransferase	NA
UHGV-0243156_32	eggNOG-mapper	1314.HKU360_01238	DNA modification methylase DNA replication, recombination, and repair	NA
UHGV-0243156_32	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0243156_32	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0243156_32	COG	COG0863	DNA modification methylase	NA
UHGV-0243156_32	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0243156_33	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0243156_33	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0243156_33	UniRef90	UniRef90_UPI00189A427D	single-stranded DNA-binding protein	NA
UHGV-0243156_33	eggNOG-mapper	545696.HOLDEFILI_00345	Single-stranded DNA-binding protein	NA
UHGV-0243156_33	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0243156_33	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0243156_33	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0243156_33	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0243156_33	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0243156_35	PHROG	phrog_19458	primase	DNA, RNA and nucleotide metabolism
UHGV-0243156_35	UniRef90	UniRef90_UPI0010565CFE	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0243156_35	eggNOG-mapper	411459.RUMOBE_01108	NA	NA
UHGV-0243156_35	COG	COG4227	Antirestriction protein ArdC	NA
UHGV-0243156_36	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0243156_36	eggNOG-mapper	428127.EUBDOL_01512	DnaD domain protein	NA
UHGV-0243156_36	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0243156_37	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0243156_37	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0243156_37	UniRef90	UniRef90_UPI001F052CB4	MBL fold metallo-hydrolase	NA
UHGV-0243156_37	eggNOG-mapper	218284.CCDN010000001_gene822	Metallo-beta-lactamase superfamily	NA
UHGV-0243156_37	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0243156_37	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0243156_37	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0243156_38	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0243156_38	PHROG	phrog_2185	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0243156_38	UniRef90	UniRef90_A0A6G8APQ8	Recombinase RecT	NA
UHGV-0243156_38	eggNOG-mapper	1449338.JQLU01000005_gene3745	NA	NA
UHGV-0243156_38	Structural annotation	NF007351, COG3723	NA	NA
UHGV-0243156_39	PHROG	phrog_1029	NA	unknown function
UHGV-0243156_39	UniRef90	UniRef90_T0TFF0	NA	NA
UHGV-0243156_39	eggNOG-mapper	1232449.BAHV02000016_gene1838	NA	NA
UHGV-0243156_39	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0243156_40	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0243156_40	UniRef90	UniRef90_R6MCS9	NA	NA
UHGV-0243156_40	eggNOG-mapper	1399115.U719_06615	NA	NA
UHGV-0243156_41	KOfam	K03704	cspA; cold shock protein	NA
UHGV-0243156_41	PHROG	phrog_729	cold shock protein	other
UHGV-0243156_41	UniRef90	UniRef90_UPI000932FCEA	cold shock domain-containing protein	NA
UHGV-0243156_41	eggNOG-mapper	403833.Pmob_0010	PFAM Cold-shock protein, DNA-binding	NA
UHGV-0243156_41	PADLOC	retron_type_V_csd_cluster85_1	NA	Retron
UHGV-0243156_41	Pfam	PF00313	'Cold-shock' DNA-binding domain	CSD
UHGV-0243156_41	COG	COG1278	Cold shock protein, CspA family	NA
UHGV-0243156_41	Structural annotation	PF00313, NF007062, COG1278	NA	NA
UHGV-0243156_42	KOfam	K03546	sbcC, rad50; DNA repair protein SbcC/Rad50	NA
UHGV-0243156_42	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0243156_42	UniRef90	UniRef90_A0A6N7S5U7	AAA family ATPase	NA
UHGV-0243156_42	eggNOG-mapper	665959.HMPREF1013_05343	nuclear chromosome segregation	NA
UHGV-0243156_42	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0243156_42	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0243156_43	KOfam	K03733	xerC; integrase/recombinase XerC	NA
UHGV-0243156_43	PHROG	phrog_1	integrase	integration and excision
UHGV-0243156_43	UniRef90	UniRef90_UPI0009327A1C	tyrosine-type recombinase/integrase	NA
UHGV-0243156_43	eggNOG-mapper	1188240.MYEA_5710	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0243156_43	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0243156_43	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0243156_43	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0243156_43	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0243156_44	PHROG	phrog_5696	NA	unknown function
UHGV-0243156_44	UniRef90	UniRef90_UPI00093468DE	N-6 DNA methylase	NA
UHGV-0243156_44	eggNOG-mapper	1235457.C404_25710	N-6 DNA Methylase	NA
UHGV-0243156_44	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0243156_44	Structural annotation	COG0286	NA	NA
UHGV-0243156_45	UniRef90	UniRef90_UPI00189B1490	glucosaminidase domain-containing protein	NA
UHGV-0243156_45	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-0243156_45	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0243156_45	Structural annotation	PF01832, NF038016, COG1705	NA	NA