UHGV-0243828

Genome information

Genome length 26,579 bps

CDS count 24

Completeness 55.67% (medium-quality)

geNomad score 0.9812

Prediction confidence Confident

Genome information
Genome ID	UHGV-0243828
vOTU ID	vOTU-031368
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	SRR10338815_141_106078_round8-12~1360291
BioSample	NA
Country	Russia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.67% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9812
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	57.38
Jumbo phage	No

Genome content
Genome length	26,579 bps
GC content	31.59%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	24
CDS density	95.68%
Average CDS length	1,063.75 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0243828_1	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0243828_1	PHROG	phrog_435	endolysin	lysis
UHGV-0243828_1	UniRef90	UniRef90_UPI001D0FBF4D	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0243828_1	eggNOG-mapper	445973.CLOBAR_01731	Ami_3	NA
UHGV-0243828_1	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0243828_1	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0243828_2	PHROG	phrog_1129	holin	lysis
UHGV-0243828_2	UniRef90	UniRef90_A0A0B3VH17	Holin	NA
UHGV-0243828_2	eggNOG-mapper	702450.CUW_0551	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0243828_2	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0243828_2	Structural annotation	PF06946	NA	NA
UHGV-0243828_3	PHROG	phrog_1193	hemolysin	other
UHGV-0243828_3	UniRef90	UniRef90_UPI0018AB0AA6	hemolysin XhlA family protein	NA
UHGV-0243828_3	eggNOG-mapper	445335.CBN_3060	Haemolysin XhlA	NA
UHGV-0243828_3	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-0243828_4	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-0243828_4	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0243828_4	eggNOG-mapper	203119.Cthe_2495	gluconolactonase activity	NA
UHGV-0243828_4	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0243828_4	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0243828_4	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0243828_4	COG	COG3386	Sugar lactone lactonase YvrE	NA
UHGV-0243828_5	PHROG	phrog_15074	NA	unknown function
UHGV-0243828_5	UniRef90	UniRef90_UPI0003716F2D	phage tail protein	NA
UHGV-0243828_5	eggNOG-mapper	411901.BACCAC_01130	COG3209 Rhs family protein	NA
UHGV-0243828_5	COG	COG4926	Phage-related protein	NA
UHGV-0243828_5	Structural annotation	PF06266, PF13157, PF13229, NF033679	NA	NA
UHGV-0243828_6	PHROG	phrog_6253	minor tail protein	tail
UHGV-0243828_6	UniRef90	UniRef90_UPI001D1653FC	phage tail protein	NA
UHGV-0243828_6	eggNOG-mapper	1458856.A0A059T7Y6_9CAUD	peptidoglycan catabolic process	NA
UHGV-0243828_6	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0243828_6	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0243828_6	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0243828_6	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0243828_6	Structural annotation	PF14594, PF08239, PF05382, TIGR01665, NF041850, NF033742, COG4926, COG4991, COG0791	NA	NA
UHGV-0243828_7	PHROG	phrog_202	distal tail protein Dit	tail
UHGV-0243828_7	UniRef90	UniRef90_A0A8I2ANU5	Phage tail family protein	NA
UHGV-0243828_7	eggNOG-mapper	1499684.CCNP01000020_gene2277	Phage tail protein	NA
UHGV-0243828_7	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0243828_7	Pfam	PF06347	Bacterial SH3 domain	SH3_4
UHGV-0243828_7	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0243828_7	COG	COG4722	Phage-related protein YomH	NA
UHGV-0243828_7	Structural annotation	PF05709, PF18342, TIGR01633, NF040670, COG4722, COG4991	NA	NA
UHGV-0243828_8	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0243828_8	UniRef90	UniRef90_A0A8I2AQT3	Phage tail tape measure protein	NA
UHGV-0243828_8	eggNOG-mapper	1405498.SSIM_10965	Phage tail tape measure protein	NA
UHGV-0243828_8	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0243828_8	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0243828_8	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0243828_8	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0243828_9	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0243828_9	UniRef90	UniRef90_R5CCP6	Phage tail tape measure protein TP901 family core region	NA
UHGV-0243828_9	eggNOG-mapper	1235802.C823_01531	Phage tail tape measure protein, TP901 family	NA
UHGV-0243828_9	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0243828_9	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0243828_9	COG	COG5283	Phage-related tail protein	NA
UHGV-0243828_11	Structural annotation	PF16478	NA	NA
UHGV-0243828_12	PHROG	phrog_1407	major tail protein	tail
UHGV-0243828_12	UniRef90	UniRef90_UPI001F33CCB9	phage tail protein	NA
UHGV-0243828_12	eggNOG-mapper	936154.STP_1264	Phage tail tube protein	NA
UHGV-0243828_12	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0243828_12	COG	COG5437	Phage tail protein, TP901-1 family	NA
UHGV-0243828_12	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0243828_13	PHROG	phrog_176	tail terminator	connector
UHGV-0243828_13	eggNOG-mapper	1215114.BBIU01000011_gene1684	NA	NA
UHGV-0243828_13	Pfam	PF11367	NA	DUF3168
UHGV-0243828_13	Structural annotation	PF11367	NA	NA
UHGV-0243828_14	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0243828_14	UniRef90	UniRef90_A0A8I1VE19	HK97 gp10 family phage protein	NA
UHGV-0243828_14	eggNOG-mapper	1504822.CCNO01000013_gene284	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0243828_14	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0243828_14	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0243828_14	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-0243828_15	Structural annotation	PF12206, TIGR01563, COG5614	NA	NA
UHGV-0243828_16	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0243828_16	UniRef90	UniRef90_A0A8I1VFB1	Phage head-tail connector protein	NA
UHGV-0243828_16	eggNOG-mapper	1071073.KI530547_gene3814	Phage gp6-like head-tail connector protein	NA
UHGV-0243828_16	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0243828_16	Structural annotation	PF05135	NA	NA
UHGV-0243828_17	PHROG	phrog_422	major head protein	head and packaging
UHGV-0243828_17	UniRef90	UniRef90_A0A8H9UTU9	Capsid protein	NA
UHGV-0243828_17	eggNOG-mapper	1280692.AUJL01000025_gene2079	NA	NA
UHGV-0243828_17	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0243828_18	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0243828_18	UniRef90	UniRef90_UPI00189D679E	NA	NA
UHGV-0243828_18	eggNOG-mapper	1280689.AUJC01000003_gene966	NA	NA
UHGV-0243828_18	Pfam	PF14265	NA	DUF4355
UHGV-0243828_18	Structural annotation	PF14265	NA	NA
UHGV-0243828_19	PHROG	phrog_4502	NA	unknown function
UHGV-0243828_19	eggNOG-mapper	1151292.QEW_3256	NA	NA
UHGV-0243828_20	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0243828_20	UniRef90	UniRef90_UPI001F22D1CF	minor capsid protein	NA
UHGV-0243828_20	eggNOG-mapper	469604.HMPREF0946_01091	Phage Mu protein F like protein	NA
UHGV-0243828_20	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0243828_20	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0243828_20	COG	COG2369	NA	NA
UHGV-0243828_20	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0243828_21	PHROG	phrog_64	portal protein	head and packaging
UHGV-0243828_21	UniRef90	UniRef90_A0A8I1VF55	Phage portal protein	NA
UHGV-0243828_21	eggNOG-mapper	1147137.I1TJV4_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0243828_21	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0243828_21	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0243828_21	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0243828_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0243828_22	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0243828_22	UniRef90	UniRef90_UPI001A9034D2	PBSX family phage terminase large subunit	NA
UHGV-0243828_22	eggNOG-mapper	929506.CbC4_1211	Phage terminase, large subunit, PBSX family	NA
UHGV-0243828_22	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0243828_22	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0243828_22	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0243828_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-0243828_22	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0243828_23	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0243828_23	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0243828_23	UniRef90	UniRef90_UPI0011DD6807	terminase small subunit	NA
UHGV-0243828_23	eggNOG-mapper	1121344.JHZO01000003_gene978	Terminase small subunit	NA
UHGV-0243828_23	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0243828_23	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0243828_23	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0243828_24	PHROG	phrog_9079	NA	unknown function
UHGV-0243828_24	eggNOG-mapper	1391646.AVSU01000053_gene947	NA	NA