UHGV-0251235

Genome information

vOTU vOTU-062020

Genome length 12,999 bps

CDS count 21

Completeness 95.07% (high-quality)

geNomad score 0.9806

Prediction confidence Confident

Genome information
Genome ID	UHGV-0251235
vOTU ID	vOTU-062020
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	ERR1398228_141_130611_round347~4075894
BioSample	SAMN06233224
Country	Spain
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.07% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9806
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	18.61
Jumbo phage	No

Genome content
Genome length	12,999 bps
GC content	49.17%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	21
CDS density	94.94%
Average CDS length	590.86 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0251235_1	Structural annotation	MF_00273, NF001981	NA	NA
UHGV-0251235_5	Structural annotation	PF00436, MF_00984, NF004512, COG0629	NA	NA
UHGV-0251235_6	PHROG	phrog_2150	terminase	head and packaging
UHGV-0251235_6	UniRef90	UniRef90_A0A843GFY2	Phage DNA encapsidation protein	NA
UHGV-0251235_6	eggNOG-mapper	10747.Q38007_BPCP1	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-0251235_6	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-0251235_6	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0251235_8	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0251235_8	PHROG	phrog_15001	endolysin	lysis
UHGV-0251235_8	UniRef90	UniRef90_R6GU62	Sporulation domain-containing protein	NA
UHGV-0251235_8	eggNOG-mapper	1235835.C814_01292	Ami_2	NA
UHGV-0251235_8	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0251235_8	Pfam	PF05036	SPOR domain	SPOR
UHGV-0251235_8	COG	COG1388	LysM repeat	NA
UHGV-0251235_8	Structural annotation	PF01510, NF008758, COG5632	NA	NA
UHGV-0251235_10	PHROG	phrog_2006	major head protein	head and packaging
UHGV-0251235_10	UniRef90	UniRef90_A0A843HBI5	Ig-like domain-containing protein	NA
UHGV-0251235_10	Structural annotation	PF21703, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0251235_11	Structural annotation	PF20934	NA	NA
UHGV-0251235_12	PHROG	phrog_2038	upper collar connector	connector
UHGV-0251235_12	UniRef90	UniRef90_A0A2Z4GUB7	Upper collar protein	NA
UHGV-0251235_12	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-0251235_12	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-0251235_12	Structural annotation	PF05352, TIGR01538, COG4695	NA	NA
UHGV-0251235_16	Structural annotation	NF012201	NA	NA
UHGV-0251235_18	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-0251235_18	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0251235_18	UniRef90	UniRef90_A0A843GHP1	DNA-directed DNA polymerase	NA
UHGV-0251235_18	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-0251235_18	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-0251235_18	Structural annotation	PF03175, MF_04055, NF004417, COG0417	NA	NA
UHGV-0251235_21	PHROG	phrog_37083	NA	unknown function