UHGV-0263073

Genome information

Genome length 19,319 bps

CDS count 24

Completeness 50.64% (medium-quality)

geNomad score 0.9795

Prediction confidence Confident

Genome information
Genome ID	UHGV-0263073
vOTU ID	vOTU-031564
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	SRR8634344_141_4438_round8-12~663496
BioSample	SAMD00011143
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.64% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9795
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.58
Jumbo phage	No

Genome content
Genome length	19,319 bps
GC content	38.20%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	24
CDS density	93.90%
Average CDS length	757.88 bps
tRNA count	1
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0263073_1	PHROG	phrog_13463	endolysin	lysis
UHGV-0263073_1	UniRef90	UniRef90_R2RM83	NlpC/P60 domain-containing protein	NA
UHGV-0263073_1	eggNOG-mapper	1140002.I570_01424	Bacteriophage peptidoglycan hydrolase	NA
UHGV-0263073_1	Pfam	PF05382	Bacteriophage peptidoglycan hydrolase	Amidase_5
UHGV-0263073_1	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0263073_1	Structural annotation	PF05382, TIGR02219, COG0791	NA	NA
UHGV-0263073_2	PHROG	phrog_32897	NA	unknown function
UHGV-0263073_2	eggNOG-mapper	1158602.I590_01701	NA	NA
UHGV-0263073_3	PHROG	phrog_1129	holin	lysis
UHGV-0263073_3	UniRef90	UniRef90_UPI00159DB359	phage holin family protein	NA
UHGV-0263073_3	eggNOG-mapper	1158602.I590_01700	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0263073_3	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0263073_3	Structural annotation	PF06946	NA	NA
UHGV-0263073_4	PHROG	phrog_4105	NA	unknown function
UHGV-0263073_4	eggNOG-mapper	1158602.I590_01699	NA	NA
UHGV-0263073_5	PHROG	phrog_10512	virion structural protein	head and packaging
UHGV-0263073_5	UniRef90	UniRef90_A0A8B5W018	NA	NA
UHGV-0263073_5	eggNOG-mapper	1140002.I570_03998	NA	NA
UHGV-0263073_5	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0263073_5	COG	COG0584	Glycerophosphoryl diester phosphodiesterase	NA
UHGV-0263073_6	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0263073_6	UniRef90	UniRef90_A0A437USA3	Peptidase S74 domain-containing protein	NA
UHGV-0263073_6	eggNOG-mapper	1158601.I585_01146	Prophage endopeptidase tail	NA
UHGV-0263073_6	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0263073_6	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0263073_6	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0263073_6	COG	COG4926	Phage-related protein	NA
UHGV-0263073_6	Structural annotation	PF14594, PF13884, TIGR01665, COG4926	NA	NA
UHGV-0263073_7	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0263073_7	UniRef90	UniRef90_UPI0010F6F3FC	phage tail protein	NA
UHGV-0263073_7	eggNOG-mapper	1158601.I585_01147	phage tail	NA
UHGV-0263073_7	COG	COG4722	Phage-related protein YomH	NA
UHGV-0263073_7	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0263073_8	PHROG	phrog_5493	tail length tape measure protein	tail
UHGV-0263073_8	UniRef90	UniRef90_A0A2N8PYK0	Rhodanese domain-containing protein	NA
UHGV-0263073_8	eggNOG-mapper	1158601.I585_01148	Phage tail tape measure protein, TP901 family	NA
UHGV-0263073_8	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0263073_9	PHROG	phrog_1686	tail length tape measure protein	tail
UHGV-0263073_9	UniRef90	UniRef90_A0A4U4E5W0	Phage tail tape measure protein (Fragment)	NA
UHGV-0263073_9	eggNOG-mapper	1158601.I585_01148	Phage tail tape measure protein, TP901 family	NA
UHGV-0263073_9	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0263073_9	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0263073_9	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0263073_10	PHROG	phrog_706	NA	unknown function
UHGV-0263073_10	UniRef90	UniRef90_UPI00159DBE16	Gp15 family bacteriophage protein	NA
UHGV-0263073_10	eggNOG-mapper	1158601.I585_01149	Bacteriophage Gp15 protein	NA
UHGV-0263073_10	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0263073_10	Structural annotation	PF06854	NA	NA
UHGV-0263073_11	PHROG	phrog_1061	NA	unknown function
UHGV-0263073_11	UniRef90	UniRef90_Q5YA63	47	NA
UHGV-0263073_11	eggNOG-mapper	1158601.I585_01150	NA	NA
UHGV-0263073_11	Structural annotation	PF10666	NA	NA
UHGV-0263073_12	UniRef90	UniRef90_A0A8B5VW17	Fibronectin type-III domain-containing protein	NA
UHGV-0263073_12	eggNOG-mapper	1033738.CAEP01000174_gene762	Bacterial Ig-like domain 2	NA
UHGV-0263073_12	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-0263073_12	COG	COG5492	NA	NA
UHGV-0263073_13	PHROG	phrog_820	major tail protein	tail
UHGV-0263073_13	UniRef90	UniRef90_A0A2N8PYJ2	Phage tail protein	NA
UHGV-0263073_13	eggNOG-mapper	1158601.I585_01151	NA	NA
UHGV-0263073_13	Structural annotation	PF08813, TIGR02126, COG5437	NA	NA
UHGV-0263073_14	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0263073_14	UniRef90	UniRef90_A0A2N8PYM1	Capsid protein	NA
UHGV-0263073_14	eggNOG-mapper	1158601.I585_01152	Minor capsid protein from bacteriophage	NA
UHGV-0263073_14	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0263073_14	Structural annotation	PF12691	NA	NA
UHGV-0263073_15	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0263073_15	UniRef90	UniRef90_UPI001C11CE54	minor capsid protein	NA
UHGV-0263073_15	eggNOG-mapper	1158601.I585_01153	Minor capsid protein	NA
UHGV-0263073_15	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0263073_15	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0263073_16	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0263073_16	UniRef90	UniRef90_A0A2N8PYJ8	Minor capsid protein	NA
UHGV-0263073_16	eggNOG-mapper	768486.EHR_02605	Minor capsid protein	NA
UHGV-0263073_16	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0263073_16	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0263073_17	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0263073_17	UniRef90	UniRef90_I6SVS1	Protein gp8	NA
UHGV-0263073_17	eggNOG-mapper	1158601.I585_01155	NA	NA
UHGV-0263073_18	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0263073_18	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0263073_18	UniRef90	UniRef90_A0A8B5VVT8	BIG2 domain-containing protein	NA
UHGV-0263073_18	eggNOG-mapper	1231377.C426_2212	domain, Protein	NA
UHGV-0263073_18	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0263073_18	COG	COG5492	NA	NA
UHGV-0263073_18	Structural annotation	PF02368, TIGR04225	NA	NA
UHGV-0263073_19	PHROG	phrog_422	major head protein	head and packaging
UHGV-0263073_19	UniRef90	UniRef90_A0A8B5VXL2	Capsid protein	NA
UHGV-0263073_19	eggNOG-mapper	1158601.I585_01156	NA	NA
UHGV-0263073_19	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0263073_20	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0263073_20	UniRef90	UniRef90_A0A8B5VV95	Capsid protein	NA
UHGV-0263073_20	eggNOG-mapper	768486.EHR_02625	Phage minor structural protein GP20	NA
UHGV-0263073_20	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0263073_20	Structural annotation	PF06810	NA	NA
UHGV-0263073_21	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0263073_21	UniRef90	UniRef90_A0A2N8PYJ7	Capsid protein	NA
UHGV-0263073_21	eggNOG-mapper	1158601.I585_01158	Phage minor capsid protein 2	NA
UHGV-0263073_21	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0263073_21	COG	COG2369	NA	NA
UHGV-0263073_21	Structural annotation	PF06152	NA	NA
UHGV-0263073_22	PHROG	phrog_1315	NA	unknown function
UHGV-0263073_22	eggNOG-mapper	1158601.I585_01159	NA	NA
UHGV-0263073_23	PHROG	phrog_533	portal protein	head and packaging
UHGV-0263073_23	UniRef90	UniRef90_A0A8B5VZ28	Poly(3-hydroxybutyrate) depolymerase	NA
UHGV-0263073_23	eggNOG-mapper	1158601.I585_01160	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0263073_23	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0263073_23	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0263073_23	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0263073_24	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0263073_24	PHROG	phrog_10250	NA	unknown function
UHGV-0263073_24	UniRef90	UniRef90_R2NJ85	PBSX family phage terminase, large subunit	NA
UHGV-0263073_24	eggNOG-mapper	1158601.I585_01161	Phage terminase, large subunit, PBSX family	NA
UHGV-0263073_24	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0263073_24	COG	COG1783	Phage terminase large subunit	NA
UHGV-0263073_24	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA