UHGV-0296921

Genome information

vOTU vOTU-011903

Genome length 41,101 bps

CDS count 52

Completeness 97.26% (high-quality)

geNomad score 0.9808

Prediction confidence Confident

Genome information
Genome ID	UHGV-0296921
vOTU ID	vOTU-011903
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k119_18555_round14~1646684
BioSample	SAMN03955557
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.26% (high-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	25
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9808
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	63.43
Jumbo phage	No

Genome content
Genome length	41,101 bps
GC content	38.34%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	52
CDS density	90.41%
Average CDS length	717.52 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0296921_1	eggNOG-mapper	411462.DORLON_01610	Glycosyl transferases group 1	NA
UHGV-0296921_1	COG	COG0438	Glycosyltransferase involved in cell wall bisynthesis	NA
UHGV-0296921_2	KOfam	K14059	int; integrase	NA
UHGV-0296921_2	PHROG	phrog_1	integrase	integration and excision
UHGV-0296921_2	UniRef90	UniRef90_H7BVF7	Tyr recombinase domain-containing protein	NA
UHGV-0296921_2	eggNOG-mapper	742740.HMPREF9474_02388	Belongs to the 'phage' integrase family	NA
UHGV-0296921_2	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0296921_2	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0296921_2	Structural annotation	PF00589, MF_01808, NF007246, COG4974	NA	NA
UHGV-0296921_3	PHROG	phrog_17658	NA	unknown function
UHGV-0296921_3	UniRef90	UniRef90_UPI0014004675	SHOCT domain-containing protein	NA
UHGV-0296921_3	eggNOG-mapper	1280692.AUJL01000004_gene836	NA	NA
UHGV-0296921_3	Structural annotation	PF18116	NA	NA
UHGV-0296921_4	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0296921_4	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0296921_4	UniRef90	UniRef90_A0A849XTP8	Helix-turn-helix transcriptional regulator	NA
UHGV-0296921_4	eggNOG-mapper	718252.FP2_01140	Helix-turn-helix XRE-family like proteins	NA
UHGV-0296921_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0296921_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0296921_4	Structural annotation	PF01381, MF_02017, NF007257, COG1396	NA	NA
UHGV-0296921_7	AcrCatalog	cluster_134091	NA	NA
UHGV-0296921_7	Structural annotation	PF18330, NF007435, COG3691	NA	NA
UHGV-0296921_8	UniRef90	UniRef90_A0A849XTM9	Toxin-antitoxin system, antitoxin component, Xre family protein	NA
UHGV-0296921_8	eggNOG-mapper	718252.FP2_01130	NA	NA
UHGV-0296921_8	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-0296921_9	PHROG	phrog_6058	NA	unknown function
UHGV-0296921_9	UniRef90	UniRef90_A0A374E7W1	XRE family transcriptional regulator	NA
UHGV-0296921_9	eggNOG-mapper	742740.HMPREF9474_02381	NA	NA
UHGV-0296921_9	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0296921_9	Structural annotation	PF01381, PF12728, MF_00535, NF041951, COG1396	NA	NA
UHGV-0296921_10	PHROG	phrog_6247	DNA topoisomerase	DNA, RNA and nucleotide metabolism
UHGV-0296921_10	eggNOG-mapper	1536772.R70723_06570	NA	NA
UHGV-0296921_10	Structural annotation	PF21180, MF_00132, NF003335, COG4026	NA	NA
UHGV-0296921_11	PHROG	phrog_5070	NA	unknown function
UHGV-0296921_11	UniRef90	UniRef90_UPI00189ACE43	polymer-forming cytoskeletal protein	NA
UHGV-0296921_11	eggNOG-mapper	887929.HMP0721_1276	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	NA
UHGV-0296921_11	COG	COG1044	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	NA
UHGV-0296921_12	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0296921_12	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0296921_12	UniRef90	UniRef90_A0A849XTM5	DEAD/DEAH box helicase	NA
UHGV-0296921_12	eggNOG-mapper	742740.HMPREF9474_02377	snf2 family	NA
UHGV-0296921_12	PADLOC	DpdE_00006	DpdE	DPD
UHGV-0296921_12	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0296921_12	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0296921_12	Structural annotation	PF00176, PF00271, MF_01821, NF041790, COG0553	NA	NA
UHGV-0296921_14	KOfam	K03698	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	NA
UHGV-0296921_14	PHROG	phrog_5889	NA	unknown function
UHGV-0296921_14	UniRef90	UniRef90_UPI001C01F314	HD domain-containing protein	NA
UHGV-0296921_14	eggNOG-mapper	742740.HMPREF9474_02372	Metal dependent phosphohydrolases with conserved 'HD' motif.	NA
UHGV-0296921_14	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-0296921_14	Structural annotation	PF07514, MF_01427, NF010007, COG3481	NA	NA
UHGV-0296921_17	PHROG	phrog_2872	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0296921_17	UniRef90	UniRef90_UPI001C017367	ATP-binding protein	NA
UHGV-0296921_17	eggNOG-mapper	742740.HMPREF9474_02369	AAA domain	NA
UHGV-0296921_17	Structural annotation	PF13479, MF_00350, TIGR01618, COG2087	NA	NA
UHGV-0296921_18	PHROG	phrog_7778	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0296921_18	UniRef90	UniRef90_A0A415N104	NA	NA
UHGV-0296921_18	eggNOG-mapper	742740.HMPREF9474_02367	NA	NA
UHGV-0296921_18	Pfam	PF05037	NA	DUF669
UHGV-0296921_18	Structural annotation	PF05037	NA	NA
UHGV-0296921_19	PHROG	phrog_1252	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0296921_19	UniRef90	UniRef90_A0A1G5G0M3	DNA polymerase	NA
UHGV-0296921_19	eggNOG-mapper	742740.HMPREF9474_02366	DNA polymerase elongation subunit (Family B)	NA
UHGV-0296921_19	COG	COG0417	DNA polymerase B elongation subunit	NA
UHGV-0296921_19	Structural annotation	PF08490, MF_04100, TIGR00592, COG0417	NA	NA
UHGV-0296921_20	Structural annotation	PF05384, NF041271, COG1579	NA	NA
UHGV-0296921_21	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0296921_21	PHROG	phrog_864	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0296921_21	UniRef90	UniRef90_A0A374E6H3	DNA primase	NA
UHGV-0296921_21	eggNOG-mapper	742740.HMPREF9474_02364	Phage plasmid primase, P4 family	NA
UHGV-0296921_21	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0296921_21	Pfam	PF19263	NA	DUF5906
UHGV-0296921_21	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0296921_21	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0296921_21	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0296921_21	Structural annotation	PF19263, PF08706, PF03288, PF09250, MF_04000, TIGR01613, COG3378	NA	NA
UHGV-0296921_23	PHROG	phrog_22740	NA	unknown function
UHGV-0296921_23	UniRef90	UniRef90_A0A417QWW0	Adenine methyltransferase	NA
UHGV-0296921_23	eggNOG-mapper	1235793.C809_02648	DNA N-6-adenine-methyltransferase	NA
UHGV-0296921_23	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-0296921_23	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0296921_24	PHROG	phrog_6568	NA	unknown function
UHGV-0296921_24	eggNOG-mapper	1203606.HMPREF1526_00241	NA	NA
UHGV-0296921_25	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0296921_25	eggNOG-mapper	742740.HMPREF9474_02360	NA	NA
UHGV-0296921_25	Structural annotation	PF07374, MF_00674, NF005248, COG2739	NA	NA
UHGV-0296921_26	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0296921_26	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0296921_26	UniRef90	UniRef90_A0A415N140	Terminase small subunit	NA
UHGV-0296921_26	eggNOG-mapper	1321778.HMPREF1982_02686	Terminase Small Subunit	NA
UHGV-0296921_26	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0296921_26	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0296921_26	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0296921_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0296921_27	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0296921_27	UniRef90	UniRef90_A0A374E8M6	PBSX family phage terminase large subunit	NA
UHGV-0296921_27	eggNOG-mapper	861454.HMPREF9099_00528	Phage terminase large subunit	NA
UHGV-0296921_27	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0296921_27	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0296921_27	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0296921_27	COG	COG1783	Phage terminase large subunit	NA
UHGV-0296921_27	HAMAP	MF_04145	Terminase, large subunit	NA
UHGV-0296921_27	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0296921_28	PHROG	phrog_1233	NA	unknown function
UHGV-0296921_28	eggNOG-mapper	397290.C810_01336	NA	NA
UHGV-0296921_28	Structural annotation	PF13058	NA	NA
UHGV-0296921_29	PHROG	phrog_64	portal protein	head and packaging
UHGV-0296921_29	UniRef90	UniRef90_A0A374E6B1	Phage portal protein	NA
UHGV-0296921_29	eggNOG-mapper	1256908.HMPREF0373_00485	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0296921_29	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0296921_29	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0296921_30	PHROG	phrog_595	head maturation protease	head and packaging
UHGV-0296921_30	UniRef90	UniRef90_A0A415N157	Phage_Mu_F domain-containing protein	NA
UHGV-0296921_30	eggNOG-mapper	1256908.HMPREF0373_00484	Phage Mu protein F like protein	NA
UHGV-0296921_30	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0296921_30	COG	COG2369	NA	NA
UHGV-0296921_30	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0296921_31	PHROG	phrog_6473	NA	unknown function
UHGV-0296921_31	eggNOG-mapper	469604.HMPREF0946_01090	NA	NA
UHGV-0296921_32	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0296921_32	UniRef90	UniRef90_UPI001373E5C4	phage scaffolding protein	NA
UHGV-0296921_32	eggNOG-mapper	1235800.C819_02235	Phage minor structural protein GP20	NA
UHGV-0296921_32	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0296921_32	Structural annotation	PF06810	NA	NA
UHGV-0296921_33	PHROG	phrog_247	major head protein	head and packaging
UHGV-0296921_33	UniRef90	UniRef90_UPI001BA5448B	major capsid protein	NA
UHGV-0296921_33	eggNOG-mapper	33035.JPJF01000106_gene3132	NA	NA
UHGV-0296921_33	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0296921_34	PHROG	phrog_1236	head protein	head and packaging
UHGV-0296921_34	eggNOG-mapper	1235800.C819_02232	NA	NA
UHGV-0296921_34	Structural annotation	PF05135	NA	NA
UHGV-0296921_35	PHROG	phrog_1059	head-tail adaptor	connector
UHGV-0296921_35	UniRef90	UniRef90_UPI00156E52AA	head-tail adaptor protein	NA
UHGV-0296921_35	eggNOG-mapper	1235800.C819_02231	NA	NA
UHGV-0296921_35	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0296921_36	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0296921_36	UniRef90	UniRef90_A0A415N123	HK97 gp10 family phage protein	NA
UHGV-0296921_36	eggNOG-mapper	1256908.HMPREF0373_00473	NA	NA
UHGV-0296921_36	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0296921_37	PHROG	phrog_957	head protein	head and packaging
UHGV-0296921_37	Structural annotation	PF12691	NA	NA
UHGV-0296921_38	PHROG	phrog_885	major tail protein	tail
UHGV-0296921_38	eggNOG-mapper	1235800.C819_02228	NA	NA
UHGV-0296921_38	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0296921_40	PHROG	phrog_1021	NA	unknown function
UHGV-0296921_41	KOfam	K20254	PLIN4; perilipin-4	NA
UHGV-0296921_41	PHROG	phrog_58	tail length tape measure protein	tail
UHGV-0296921_41	eggNOG-mapper	742765.HMPREF9457_02136	nuclear chromosome segregation	NA
UHGV-0296921_41	Pfam	PF12699	phiKZ-like phage internal head proteins	phiKZ_IP
UHGV-0296921_41	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-0296921_41	COG	COG1511	NA	NA
UHGV-0296921_41	Structural annotation	PF20155, COG5281	NA	NA
UHGV-0296921_42	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0296921_42	UniRef90	UniRef90_A0A374E6F6	MtfA protein	NA
UHGV-0296921_42	eggNOG-mapper	411490.ANACAC_00709	phage tail	NA
UHGV-0296921_42	COG	COG4722	Phage-related protein YomH	NA
UHGV-0296921_42	Structural annotation	PF05709, PF11699, TIGR01633, NF009806, COG4722	NA	NA
UHGV-0296921_43	PHROG	phrog_9886	NA	unknown function
UHGV-0296921_43	UniRef90	UniRef90_A0A374E8F3	Peptidase S74 domain-containing protein	NA
UHGV-0296921_43	eggNOG-mapper	1120933.ATUY01000002_gene164	Prophage endopeptidase tail	NA
UHGV-0296921_43	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0296921_43	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0296921_43	COG	COG4926	Phage-related protein	NA
UHGV-0296921_43	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0296921_45	KOfam	K05636	LAMB1; laminin, beta 1	NA
UHGV-0296921_45	PHROG	phrog_5302	tail protein	tail
UHGV-0296921_45	UniRef90	UniRef90_A0A564WU27	Chromosome partition protein Smc	NA
UHGV-0296921_45	eggNOG-mapper	742740.HMPREF9474_02337	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0296921_45	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0296921_46	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0296921_46	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0296921_46	UniRef90	UniRef90_A0A374E6B3	Reverse transcriptase	NA
UHGV-0296921_46	eggNOG-mapper	742740.HMPREF9474_02336	COG COG3344 Retron-type reverse transcriptase	NA
UHGV-0296921_46	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0296921_46	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0296921_46	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0296921_46	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0296921_47	PHROG	phrog_18126	NA	unknown function
UHGV-0296921_48	PHROG	phrog_1382	NA	unknown function
UHGV-0296921_48	UniRef90	UniRef90_A0A6N9P4T5	ASCH domain-containing protein	NA
UHGV-0296921_48	eggNOG-mapper	1232443.BAIA02000106_gene3179	NA	NA
UHGV-0296921_48	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0296921_48	Structural annotation	NF040910	NA	NA
UHGV-0296921_49	PHROG	phrog_1382	NA	unknown function
UHGV-0296921_49	eggNOG-mapper	742740.HMPREF9474_02334	NA	NA
UHGV-0296921_49	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0296921_50	PHROG	phrog_4105	NA	unknown function
UHGV-0296921_50	eggNOG-mapper	411459.RUMOBE_00911	NA	NA
UHGV-0296921_51	PHROG	phrog_10091	holin	lysis
UHGV-0296921_51	UniRef90	UniRef90_A0A374E7T7	Phage holin	NA
UHGV-0296921_51	eggNOG-mapper	428127.EUBDOL_01206	COG5546 Small integral membrane protein	NA
UHGV-0296921_51	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0296921_51	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0296921_51	COG	COG5546	NA	NA
UHGV-0296921_51	Structural annotation	COG5546	NA	NA
UHGV-0296921_52	KOfam	K02395	flgJ; peptidoglycan hydrolase FlgJ	NA
UHGV-0296921_52	PHROG	phrog_3513	endolysin	lysis
UHGV-0296921_52	UniRef90	UniRef90_A0A415N133	CHAP domain-containing protein	NA
UHGV-0296921_52	eggNOG-mapper	483218.BACPEC_01324	amidase activity	NA
UHGV-0296921_52	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-0296921_52	Pfam	PF05257	CHAP domain	CHAP
UHGV-0296921_52	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0296921_52	COG	COG1388	LysM repeat	NA
UHGV-0296921_52	Structural annotation	PF08230, PF01832, PF10030, NF038016, TIGR02594, COG1705, COG4322	NA	NA