UHGV-0301395

Genome information

Genome length 21,638 bps

CDS count 25

Completeness 53.57% (medium-quality)

geNomad score 0.9806

Prediction confidence Confident

Genome information
Genome ID	UHGV-0301395
vOTU ID	vOTU-031890
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	SRR3131782_141_6107_round347~1695820
BioSample	NA
Country	United States
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.57% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9806
Virus hallmark genes (geNomad)	14
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.89
Jumbo phage	No

Genome content
Genome length	21,638 bps
GC content	51.79%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	25
CDS density	94.26%
Average CDS length	817.20 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0301395_1	KOfam	K03791	K03791; putative chitinase	NA
UHGV-0301395_1	PHROG	phrog_181	endolysin	lysis
UHGV-0301395_1	UniRef90	UniRef90_G8C7W0	Endochitinase	NA
UHGV-0301395_1	eggNOG-mapper	906669.G8C7W0_9CAUD	chitin catabolic process	NA
UHGV-0301395_1	Pfam	PF00182	Chitinase class I	Glyco_hydro_19
UHGV-0301395_1	Structural annotation	PF00182, TIGR02282, COG3179	NA	NA
UHGV-0301395_2	PHROG	phrog_1026	Rz-like spanin	lysis
UHGV-0301395_2	UniRef90	UniRef90_UPI001C5AC0A9	NA	NA
UHGV-0301395_2	eggNOG-mapper	906669.G8C7W1_9CAUD	NA	NA
UHGV-0301395_3	UniRef90	UniRef90_UPI00123A2AFC	GNAT family N-acetyltransferase	NA
UHGV-0301395_3	eggNOG-mapper	338969.Rfer_4419	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins	NA
UHGV-0301395_3	Pfam	PF00583	Acetyltransferase (GNAT) family	Acetyltransf_1
UHGV-0301395_3	COG	COG1670	Protein N-acetyltransferase, RimJ/RimL family	NA
UHGV-0301395_4	PHROG	phrog_29765	NA	unknown function
UHGV-0301395_4	UniRef90	UniRef90_A0A2Z5H073	NA	NA
UHGV-0301395_5	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0301395_5	UniRef90	UniRef90_A0A0P8HY14	Terminase	NA
UHGV-0301395_5	eggNOG-mapper	640513.Entas_3083	TIGRFAM phage terminase, small subunit	NA
UHGV-0301395_5	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0301395_5	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0301395_5	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0301395_5	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0301395_6	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0301395_6	UniRef90	UniRef90_Q8HAD6	Sb2	NA
UHGV-0301395_6	eggNOG-mapper	640513.Entas_3082	Phage Terminase	NA
UHGV-0301395_6	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0301395_6	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0301395_6	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0301395_6	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0301395_7	PHROG	phrog_502	membrane protein	moron, auxiliary metabolic gene and host takeover
UHGV-0301395_7	eggNOG-mapper	640513.Entas_3081	NA	NA
UHGV-0301395_8	PHROG	phrog_12	portal protein	head and packaging
UHGV-0301395_8	UniRef90	UniRef90_A0A198GFH1	Phage portal protein	NA
UHGV-0301395_8	eggNOG-mapper	640513.Entas_3080	TIGRFAM Phage portal protein, HK97	NA
UHGV-0301395_8	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0301395_8	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0301395_8	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0301395_8	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0301395_9	KOfam	K06904	NA	NA
UHGV-0301395_9	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0301395_9	UniRef90	UniRef90_A0A1R0FV47	Primosome assembly protein PriA	NA
UHGV-0301395_9	eggNOG-mapper	640513.Entas_3079	Caudovirus prohead serine protease	NA
UHGV-0301395_9	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0301395_9	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0301395_9	COG	COG3740	Phage head maturation protease	NA
UHGV-0301395_9	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0301395_10	PHROG	phrog_10	major head protein	head and packaging
UHGV-0301395_10	UniRef90	UniRef90_E6WKD7	Phage major capsid protein, HK97 family	NA
UHGV-0301395_10	eggNOG-mapper	640513.Entas_3078	TIGRFAM Phage major capsid protein, HK97	NA
UHGV-0301395_10	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0301395_10	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0301395_10	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0301395_10	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0301395_11	PHROG	phrog_21989	NA	unknown function
UHGV-0301395_11	UniRef90	UniRef90_A0A198GH71	FtsK family cell division protein	NA
UHGV-0301395_11	eggNOG-mapper	754331.AEME01000001_gene206	NA	NA
UHGV-0301395_12	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0301395_12	UniRef90	UniRef90_A0A198GF77	Phage gp6-like head-tail connector protein	NA
UHGV-0301395_12	eggNOG-mapper	640513.Entas_3076	Phage gp6-like head-tail connector protein	NA
UHGV-0301395_12	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0301395_12	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0301395_12	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0301395_13	PHROG	phrog_25	head closure Hc1	connector
UHGV-0301395_13	UniRef90	UniRef90_A0A2J0PEH1	Head-tail adaptor protein	NA
UHGV-0301395_13	eggNOG-mapper	35703.DQ02_21675	head-tail adaptor	NA
UHGV-0301395_13	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0301395_13	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0301395_13	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0301395_13	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0301395_14	PHROG	phrog_23409	NA	unknown function
UHGV-0301395_14	UniRef90	UniRef90_A0A7T0DT37	HK97 gp10 family phage protein	NA
UHGV-0301395_14	eggNOG-mapper	1147158.K7PH84_9CAUD	exonuclease activity	NA
UHGV-0301395_14	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0301395_14	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0301395_14	Structural annotation	TIGR01725	NA	NA
UHGV-0301395_15	PHROG	phrog_347	tail terminator	connector
UHGV-0301395_15	UniRef90	UniRef90_A0A7L7IU88	NA	NA
UHGV-0301395_15	eggNOG-mapper	1147157.K7PM93_9CAUD	NA	NA
UHGV-0301395_15	Structural annotation	PF11367	NA	NA
UHGV-0301395_16	PHROG	phrog_158	major tail protein	tail
UHGV-0301395_16	UniRef90	UniRef90_K7P835	Major tail subunit	NA
UHGV-0301395_16	eggNOG-mapper	37554.Q9MCS7_BPHK7	NA	NA
UHGV-0301395_16	Pfam	PF13895	Immunoglobulin domain	Ig_2
UHGV-0301395_16	Structural annotation	PF16461, PF13895, MF_04116, TIGR02126, COG5437	NA	NA
UHGV-0301395_17	PHROG	phrog_14766	tail protein	tail
UHGV-0301395_17	UniRef90	UniRef90_K7P853	Tail assembly chaperone	NA
UHGV-0301395_17	eggNOG-mapper	1147157.K7PKV6_9CAUD	Pfam:Phage_TAC_1	NA
UHGV-0301395_17	Pfam	PF06222	Phage tail assembly chaperone	Phage_TAC_1
UHGV-0301395_17	Structural annotation	PF06222	NA	NA
UHGV-0301395_18	PHROG	phrog_14766	tail protein	tail
UHGV-0301395_18	UniRef90	UniRef90_A0A6S5JNV0	Phage tail protein	NA
UHGV-0301395_18	eggNOG-mapper	1147157.K7PJX0_9CAUD	NA	NA
UHGV-0301395_18	Pfam	PF13227	NA	DUF4035
UHGV-0301395_18	Structural annotation	PF06223, TIGR01715	NA	NA
UHGV-0301395_19	PHROG	phrog_8436	NA	unknown function
UHGV-0301395_19	UniRef90	UniRef90_A0A5I0M382	Zinc ribbon domain-containing protein	NA
UHGV-0301395_19	eggNOG-mapper	911008.GLAD_04139	zinc-ribbon domain	NA
UHGV-0301395_19	Pfam	PF13248	zinc-ribbon domain	zf-ribbon_3
UHGV-0301395_20	PHROG	phrog_339	tail length tape measure protein	tail
UHGV-0301395_20	UniRef90	UniRef90_A0A6S5XMS8	Phage tail tape measure protein	NA
UHGV-0301395_20	eggNOG-mapper	911008.GLAD_04140	tape measure protein	NA
UHGV-0301395_20	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0301395_20	Pfam	PF06120	Tail length tape measure protein	Phage_HK97_TLTM
UHGV-0301395_20	Pfam	PF09718	Lambda phage tail tape-measure protein (Tape_meas_lam_C)	Tape_meas_lam_C
UHGV-0301395_20	NCBIFam	TIGR01541.1	phage tail tape measure protein	NA
UHGV-0301395_20	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0301395_20	Structural annotation	PF20155, PF06120, TIGR02338, TIGR01541, COG5281	NA	NA
UHGV-0301395_21	PHROG	phrog_14	minor tail protein	tail
UHGV-0301395_21	UniRef90	UniRef90_A0A7H0MAW3	Phage tail protein	NA
UHGV-0301395_21	eggNOG-mapper	1115515.EV102420_11_00060	Phage minor tail protein	NA
UHGV-0301395_21	Pfam	PF05939	Phage minor tail protein	Phage_min_tail
UHGV-0301395_21	COG	COG4718	Phage tail protein	NA
UHGV-0301395_21	Structural annotation	PF05939, TIGR02217, COG4718	NA	NA
UHGV-0301395_22	PHROG	phrog_18	minor tail protein	tail
UHGV-0301395_22	UniRef90	UniRef90_A0A2H9EHC2	Phage minor tail protein L	NA
UHGV-0301395_22	eggNOG-mapper	1115515.EV102420_11_00050	Phage minor tail protein L	NA
UHGV-0301395_22	Pfam	PF05100	Phage minor tail protein L	Phage_tail_L
UHGV-0301395_22	NCBIFam	TIGR01600.1	phage minor tail protein L	NA
UHGV-0301395_22	COG	COG4672	Phage tail protein	NA
UHGV-0301395_22	Structural annotation	PF05100, TIGR01600, COG4672	NA	NA
UHGV-0301395_23	KOfam	K21140	mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]	NA
UHGV-0301395_23	PHROG	phrog_30	minor tail protein	tail
UHGV-0301395_23	UniRef90	UniRef90_A0A0F1A581	Peptidase P60	NA
UHGV-0301395_23	eggNOG-mapper	1115515.EV102420_11_00040	Corresponds to locus_tag	NA
UHGV-0301395_23	Pfam	PF14464	Prokaryotic homologs of the JAB domain	Prok-JAB
UHGV-0301395_23	Pfam	PF00877	NlpC/P60 family	NLPC_P60
UHGV-0301395_23	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0301395_23	Structural annotation	PF14464, PF00877, NF041370, TIGR02219, COG1310, COG0791	NA	NA
UHGV-0301395_24	PHROG	phrog_32	tail assembly protein	tail
UHGV-0301395_24	UniRef90	UniRef90_A0A330DX40	Tail assembly protein	NA
UHGV-0301395_24	eggNOG-mapper	1115515.EV102420_11_00030	Bacteriophage lambda tail assembly protein I	NA
UHGV-0301395_24	Pfam	PF06805	Bacteriophage lambda tail assembly protein I	Lambda_tail_I
UHGV-0301395_24	COG	COG4723	Phage-related protein, tail assembly protein I	NA
UHGV-0301395_24	Structural annotation	PF06805, NF008347, COG4723	NA	NA
UHGV-0301395_25	PHROG	phrog_2589	tail protein	tail
UHGV-0301395_25	UniRef90	UniRef90_UPI001005809C	phage tail protein	NA
UHGV-0301395_25	eggNOG-mapper	1115515.EV102420_11_00020	Fibronectin type 3 domain	NA
UHGV-0301395_25	Pfam	PF13550	Putative phage tail protein	Phage-tail_3
UHGV-0301395_25	Pfam	PF09327	NA	DUF1983
UHGV-0301395_25	COG	COG0840	Methyl-accepting chemotaxis protein (MCP)	NA
UHGV-0301395_25	Structural annotation	PF09327, PF13550, PF16323, PF16383, PF14109, NF040662, COG4733	NA	NA