UHGV-0303843

Genome information

vOTU vOTU-020100

Genome length 26,345 bps

CDS count 39

Completeness 65.94% (medium-quality)

geNomad score 0.9747

Prediction confidence Confident

Genome information
Genome ID	UHGV-0303843
vOTU ID	vOTU-020100
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k141_2870_round13~5356277
BioSample	SAMN03398862
Country	Unknown
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.94% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9747
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	7.21
Jumbo phage	No

Genome content
Genome length	26,345 bps
GC content	29.67%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	39
CDS density	94.30%
Average CDS length	638.31 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0303843_1	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0303843_1	PHROG	phrog_15982	NA	unknown function
UHGV-0303843_1	UniRef90	UniRef90_UPI001B390F21	ParB N-terminal domain-containing protein	NA
UHGV-0303843_1	eggNOG-mapper	641107.CDLVIII_1319	ParB-like nuclease domain	NA
UHGV-0303843_1	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0303843_1	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0303843_1	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0303843_3	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0303843_4	eggNOG-mapper	632245.CLP_2927	NA	NA
UHGV-0303843_6	PHROG	phrog_21803	NA	unknown function
UHGV-0303843_7	PHROG	phrog_7934	NA	unknown function
UHGV-0303843_7	UniRef90	UniRef90_Q8SBL4	Gp40 protein	NA
UHGV-0303843_8	eggNOG-mapper	999411.HMPREF1092_03351	NA	NA
UHGV-0303843_9	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0303843_9	PHROG	phrog_23224	DNA methyltransferase	other
UHGV-0303843_9	UniRef90	UniRef90_A0A3P6KGL0	Methyltransferase	NA
UHGV-0303843_9	eggNOG-mapper	1345695.CLSA_c30050	DNA methylase	NA
UHGV-0303843_9	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-0303843_9	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0303843_9	COG	COG0863	DNA modification methylase	NA
UHGV-0303843_9	Structural annotation	PF01555, NF010253, COG0863	NA	NA
UHGV-0303843_12	PHROG	phrog_1558	NA	unknown function
UHGV-0303843_12	UniRef90	UniRef90_A0A6P1YDM0	Sigma70_r4_2 domain-containing protein	NA
UHGV-0303843_12	eggNOG-mapper	1262449.CP6013_3188	NA	NA
UHGV-0303843_12	Structural annotation	TIGR01637	NA	NA
UHGV-0303843_13	PHROG	phrog_15827	NA	unknown function
UHGV-0303843_13	UniRef90	UniRef90_A0A3F2ZYD5	Conserved domain protein	NA
UHGV-0303843_13	eggNOG-mapper	86416.Clopa_2534	DNA-directed 5'-3' RNA polymerase activity	NA
UHGV-0303843_13	COG	COG1996	DNA-directed RNA polymerase, subunit RPC12/RpoP, contains C4-type Zn-finger	NA
UHGV-0303843_13	Structural annotation	PF09723, TIGR02605, COG1996	NA	NA
UHGV-0303843_14	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0303843_14	PHROG	phrog_216	integrase	integration and excision
UHGV-0303843_14	UniRef90	UniRef90_UPI001B3600C2	tyrosine-type recombinase/integrase	NA
UHGV-0303843_14	eggNOG-mapper	97138.C820_00621	integrase family	NA
UHGV-0303843_14	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0303843_14	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0303843_14	Structural annotation	PF00589, MF_02055, NF040815, COG4973	NA	NA
UHGV-0303843_15	KOfam	K14060	pinR; putative DNA-invertase from lambdoid prophage Rac	NA
UHGV-0303843_15	PHROG	phrog_125	DNA invertase	DNA, RNA and nucleotide metabolism
UHGV-0303843_15	UniRef90	UniRef90_UPI001B365B96	recombinase family protein	NA
UHGV-0303843_15	eggNOG-mapper	545243.BAEV01000004_gene878	Helix-turn-helix domain of resolvase	NA
UHGV-0303843_15	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0303843_15	Pfam	PF02796	Helix-turn-helix domain of resolvase	HTH_7
UHGV-0303843_15	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0303843_15	Structural annotation	PF00239, PF02796, MF_00489, NF009949, COG1961	NA	NA
UHGV-0303843_16	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-0303843_16	UniRef90	UniRef90_UPI001B371371	phage terminase small subunit	NA
UHGV-0303843_16	eggNOG-mapper	1415774.U728_3757	DNA packaging	NA
UHGV-0303843_16	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0303843_16	COG	COG5484	NA	NA
UHGV-0303843_17	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0303843_17	PHROG	phrog_10250	NA	unknown function
UHGV-0303843_17	UniRef90	UniRef90_UPI0005C20E23	terminase	NA
UHGV-0303843_17	eggNOG-mapper	1280692.AUJL01000027_gene2166	Phage terminase, large subunit, PBSX family	NA
UHGV-0303843_17	COG	COG1783	Phage terminase large subunit	NA
UHGV-0303843_17	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0303843_18	PHROG	phrog_533	portal protein	head and packaging
UHGV-0303843_18	UniRef90	UniRef90_A0A6L9ERX1	Capsid protein	NA
UHGV-0303843_18	eggNOG-mapper	1294142.CINTURNW_1024	NA	NA
UHGV-0303843_18	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0303843_18	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0303843_19	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0303843_19	UniRef90	UniRef90_UPI001B37F66E	capsid protein	NA
UHGV-0303843_19	eggNOG-mapper	1294142.CINTURNW_1025	NA	NA
UHGV-0303843_19	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0303843_19	COG	COG5529	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	NA
UHGV-0303843_19	Structural annotation	PF06152	NA	NA
UHGV-0303843_21	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0303843_21	UniRef90	UniRef90_UPI001D78631E	phage scaffolding protein	NA
UHGV-0303843_21	eggNOG-mapper	1294142.CINTURNW_1028	Phage minor structural protein GP20	NA
UHGV-0303843_21	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0303843_21	Structural annotation	PF06810	NA	NA
UHGV-0303843_22	PHROG	phrog_212	major head protein	head and packaging
UHGV-0303843_22	UniRef90	UniRef90_A0A6L9EQP3	Phage capsid protein	NA
UHGV-0303843_22	eggNOG-mapper	1294142.CINTURNW_1029	NA	NA
UHGV-0303843_22	Pfam	PF20911	Major capsid protein GP7	GP7
UHGV-0303843_22	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0303843_23	UniRef90	UniRef90_UPI001B3835E3	bacterial Ig-like domain-containing protein	NA
UHGV-0303843_23	eggNOG-mapper	768710.DesyoDRAFT_1324	Listeria-Bacteroides repeat domain (List_Bact_rpt)	NA
UHGV-0303843_23	Pfam	PF07523	Bacterial Ig-like domain (group 3)	Big_3
UHGV-0303843_23	COG	COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	NA
UHGV-0303843_24	PHROG	phrog_10541	NA	unknown function
UHGV-0303843_24	UniRef90	UniRef90_A0A841L8S8	Rho_N domain-containing protein	NA
UHGV-0303843_24	eggNOG-mapper	1294142.CINTURNW_1030	NA	NA
UHGV-0303843_25	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0303843_25	eggNOG-mapper	1294142.CINTURNW_1031	NA	NA
UHGV-0303843_26	PHROG	phrog_8710	NA	unknown function
UHGV-0303843_26	UniRef90	UniRef90_UPI0018A9BDCF	ParB/RepB/Spo0J family partition protein	NA
UHGV-0303843_26	eggNOG-mapper	1294142.CINTURNW_1032	NA	NA
UHGV-0303843_27	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0303843_27	UniRef90	UniRef90_UPI001D4D3E00	minor capsid protein	NA
UHGV-0303843_27	eggNOG-mapper	1294142.CINTURNW_1033	NA	NA
UHGV-0303843_28	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0303843_28	UniRef90	UniRef90_UPI001C0D684F	minor capsid protein	NA
UHGV-0303843_28	eggNOG-mapper	1294142.CINTURNW_1034	NA	NA
UHGV-0303843_28	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0303843_28	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0303843_29	PHROG	phrog_820	major tail protein	tail
UHGV-0303843_29	eggNOG-mapper	1391647.AVSV01000003_gene1814	NA	NA
UHGV-0303843_29	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0303843_30	PHROG	phrog_8300	NA	unknown function
UHGV-0303843_30	UniRef90	UniRef90_UPI00156F73E9	Gp15 family bacteriophage protein	NA
UHGV-0303843_30	eggNOG-mapper	1280692.AUJL01000027_gene2153	NA	NA
UHGV-0303843_30	Structural annotation	PF06896	NA	NA
UHGV-0303843_31	PHROG	phrog_8355	NA	unknown function
UHGV-0303843_31	UniRef90	UniRef90_UPI001B38A767	Gp15 family bacteriophage protein	NA
UHGV-0303843_31	eggNOG-mapper	1280692.AUJL01000027_gene2152	NA	NA
UHGV-0303843_31	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0303843_31	Structural annotation	PF06854	NA	NA
UHGV-0303843_32	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0303843_32	UniRef90	UniRef90_UPI0003F4F1A1	membrane protein	NA
UHGV-0303843_32	eggNOG-mapper	1294142.CINTURNW_1038	phage tail tape measure protein	NA
UHGV-0303843_32	COG	COG1511	NA	NA
UHGV-0303843_33	PHROG	phrog_1194	NA	unknown function
UHGV-0303843_33	eggNOG-mapper	645991.Sgly_0353	NA	NA
UHGV-0303843_33	Pfam	PF20458	NA	DUF6711
UHGV-0303843_33	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0303843_34	PHROG	phrog_13879	NA	unknown function
UHGV-0303843_34	eggNOG-mapper	645991.Sgly_0356	NA	NA
UHGV-0303843_35	PHROG	phrog_18725	NA	unknown function
UHGV-0303843_35	UniRef90	UniRef90_UPI001C0CBD9B	PF13754 domain-containing protein	NA
UHGV-0303843_35	eggNOG-mapper	1122919.KB905559_gene1343	NA	NA
UHGV-0303843_36	PHROG	phrog_17334	NA	unknown function
UHGV-0303843_36	UniRef90	UniRef90_A0A2Z4WAP2	Inorganic polyphosphate kinase	NA
UHGV-0303843_36	eggNOG-mapper	1414720.CBYM010000002_gene558	GDSL-like Lipase/Acylhydrolase	NA
UHGV-0303843_36	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0303843_37	PHROG	phrog_36643	NA	unknown function
UHGV-0303843_37	UniRef90	UniRef90_UPI0012EB81B7	Ig-like domain-containing protein	NA
UHGV-0303843_37	eggNOG-mapper	1410653.JHVC01000006_gene204	cell wall binding repeat	NA
UHGV-0303843_37	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0303843_37	COG	COG2247	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	NA
UHGV-0303843_38	PHROG	phrog_4577	tail protein	tail
UHGV-0303843_38	UniRef90	UniRef90_UPI00140814F9	pectinesterase family protein	NA
UHGV-0303843_38	eggNOG-mapper	610130.Closa_1411	NA	NA
UHGV-0303843_38	Structural annotation	NF041901	NA	NA
UHGV-0303843_39	UniRef90	UniRef90_A0A3P6KT81	RNA polymerase sigma factor	NA