UHGV-0314241

Genome information

vOTU vOTU-019486

Genome length 34,476 bps

CDS count 49

Completeness 85.58% (medium-quality)

geNomad score 0.9726

Prediction confidence Confident

Genome information
Genome ID	UHGV-0314241
vOTU ID	vOTU-019486
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k99_2386_round8-12~1955871
BioSample	NA
Country	Russia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	85.58% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	26
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9726
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	62.65
Jumbo phage	No

Genome content
Genome length	34,476 bps
GC content	36.71%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	49
CDS density	91.24%
Average CDS length	643.65 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0314241_1	PHROG	phrog_1536	NA	unknown function
UHGV-0314241_1	eggNOG-mapper	1104325.M7W_1370	NA	NA
UHGV-0314241_2	PHROG	phrog_10054	NA	unknown function
UHGV-0314241_2	UniRef90	UniRef90_UPI000CF34261	BppU family phage baseplate upper protein	NA
UHGV-0314241_2	eggNOG-mapper	1104325.M7W_1369	InterPro IPR018913 Domain of	NA
UHGV-0314241_2	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0314241_2	Structural annotation	PF10651, PF18573, PF01105, NF033147, NF032891	NA	NA
UHGV-0314241_3	PHROG	phrog_4577	tail protein	tail
UHGV-0314241_3	eggNOG-mapper	1104325.M7W_1368	NA	NA
UHGV-0314241_3	Structural annotation	NF041901	NA	NA
UHGV-0314241_4	PHROG	phrog_326	tail protein with endopeptidase domain	other
UHGV-0314241_4	UniRef90	UniRef90_UPI00189A61D2	phage tail protein	NA
UHGV-0314241_4	eggNOG-mapper	1104325.M7W_1367	Prophage endopeptidase tail	NA
UHGV-0314241_4	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0314241_4	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0314241_4	COG	COG4926	Phage-related protein	NA
UHGV-0314241_4	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0314241_5	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0314241_5	UniRef90	UniRef90_S4FH66	Phage tail component protein	NA
UHGV-0314241_5	eggNOG-mapper	1104325.M7W_1366	Phage tail protein	NA
UHGV-0314241_5	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0314241_5	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0314241_6	KOfam	K08757	APOA1; apolipoprotein A-I	NA
UHGV-0314241_6	PHROG	phrog_167	tail length tape measure protein	tail
UHGV-0314241_6	UniRef90	UniRef90_U2QDL4	TMP_3 domain-containing protein	NA
UHGV-0314241_6	eggNOG-mapper	1140001.I571_02119	Transglycosylase SLT domain	NA
UHGV-0314241_6	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0314241_6	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0314241_6	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0314241_6	Structural annotation	PF20155, PF18013, TIGR01760, COG3941, COG3953	NA	NA
UHGV-0314241_7	PHROG	phrog_706	NA	unknown function
UHGV-0314241_7	UniRef90	UniRef90_C9AN02	Bacteriophage Gp15 protein	NA
UHGV-0314241_7	eggNOG-mapper	1104325.M7W_1364	Bacteriophage Gp15 protein	NA
UHGV-0314241_7	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0314241_7	Structural annotation	PF06854	NA	NA
UHGV-0314241_8	PHROG	phrog_10257	minor head protein	head and packaging
UHGV-0314241_8	UniRef90	UniRef90_C9AN01	Predicted protein	NA
UHGV-0314241_8	eggNOG-mapper	1104325.M7W_1363	NA	NA
UHGV-0314241_8	Structural annotation	PF10666	NA	NA
UHGV-0314241_9	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0314241_9	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0314241_9	UniRef90	UniRef90_A0A6B3Q622	Ig domain-containing protein	NA
UHGV-0314241_9	eggNOG-mapper	1140001.I571_02116	domain, Protein	NA
UHGV-0314241_9	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0314241_9	COG	COG5492	NA	NA
UHGV-0314241_9	Structural annotation	PF02368	NA	NA
UHGV-0314241_10	PHROG	phrog_820	major tail protein	tail
UHGV-0314241_10	UniRef90	UniRef90_A0A437UPK4	Capsid protein	NA
UHGV-0314241_10	eggNOG-mapper	1140001.I571_02115	domain, Protein	NA
UHGV-0314241_10	COG	COG5492	NA	NA
UHGV-0314241_10	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0314241_11	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0314241_11	UniRef90	UniRef90_UPI0018A2E21A	capsid protein	NA
UHGV-0314241_11	eggNOG-mapper	1140001.I571_02114	Minor capsid protein from bacteriophage	NA
UHGV-0314241_11	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0314241_11	Structural annotation	PF12691	NA	NA
UHGV-0314241_12	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0314241_12	UniRef90	UniRef90_A0A345FQJ7	Capsid protein	NA
UHGV-0314241_12	eggNOG-mapper	1140001.I571_02113	Minor capsid protein	NA
UHGV-0314241_12	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0314241_12	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0314241_13	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0314241_13	UniRef90	UniRef90_UPI00090013CF	putative minor capsid protein	NA
UHGV-0314241_13	eggNOG-mapper	1140001.I571_02112	Minor capsid protein	NA
UHGV-0314241_13	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0314241_13	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0314241_14	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0314241_14	UniRef90	UniRef90_A0A0B8QYX3	Coenzyme F420-reducing hydrogenase, beta subunit	NA
UHGV-0314241_14	eggNOG-mapper	1140001.I571_02111	NA	NA
UHGV-0314241_15	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0314241_15	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0314241_15	UniRef90	UniRef90_A0A828ZU37	BIG2 domain-containing protein	NA
UHGV-0314241_15	eggNOG-mapper	1140001.I571_02110	domain, Protein	NA
UHGV-0314241_15	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0314241_15	COG	COG5492	NA	NA
UHGV-0314241_15	Structural annotation	PF02368	NA	NA
UHGV-0314241_16	PHROG	phrog_422	major head protein	head and packaging
UHGV-0314241_16	UniRef90	UniRef90_A0A829A4D2	BIG2 domain-containing protein	NA
UHGV-0314241_16	eggNOG-mapper	1140001.I571_02109	NA	NA
UHGV-0314241_16	Structural annotation	PF20911	NA	NA
UHGV-0314241_17	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0314241_17	UniRef90	UniRef90_S4E2G7	Phage minor structural protein GP20	NA
UHGV-0314241_17	eggNOG-mapper	1158614.I592_01120	Phage minor structural protein GP20	NA
UHGV-0314241_17	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0314241_17	Structural annotation	PF06810	NA	NA
UHGV-0314241_18	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0314241_18	UniRef90	UniRef90_S4EI20	Phage minor capsid protein 2	NA
UHGV-0314241_18	eggNOG-mapper	1158614.I592_01119	Phage minor capsid protein 2	NA
UHGV-0314241_18	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0314241_18	Structural annotation	PF06152	NA	NA
UHGV-0314241_19	PHROG	phrog_533	portal protein	head and packaging
UHGV-0314241_19	UniRef90	UniRef90_U2QDK2	Capsid protein	NA
UHGV-0314241_19	eggNOG-mapper	1158614.I592_01118	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0314241_19	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0314241_19	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0314241_19	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0314241_20	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0314241_20	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0314241_20	UniRef90	UniRef90_UPI00115DD234	PBSX family phage terminase large subunit	NA
UHGV-0314241_20	eggNOG-mapper	1158601.I585_00701	Terminase RNAseH like domain	NA
UHGV-0314241_20	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0314241_20	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0314241_20	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0314241_20	COG	COG1783	Phage terminase large subunit	NA
UHGV-0314241_20	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0314241_21	PHROG	phrog_509	terminase small subunit	head and packaging
UHGV-0314241_21	UniRef90	UniRef90_UPI00196B2C2C	phage terminase small subunit	NA
UHGV-0314241_21	eggNOG-mapper	1140001.I571_02104	DNA packaging	NA
UHGV-0314241_21	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0314241_21	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0314241_21	COG	COG5484	NA	NA
UHGV-0314241_21	Structural annotation	NF040601, COG5484	NA	NA
UHGV-0314241_22	PHROG	phrog_918	NA	unknown function
UHGV-0314241_22	UniRef90	UniRef90_UPI0013D7DEC2	NA	NA
UHGV-0314241_22	eggNOG-mapper	1260356.D920_00086	NA	NA
UHGV-0314241_22	Pfam	PF19791	NA	DUF6275
UHGV-0314241_22	Structural annotation	PF19791	NA	NA
UHGV-0314241_23	PHROG	phrog_35027	NA	unknown function
UHGV-0314241_23	UniRef90	UniRef90_C9B729	Predicted protein	NA
UHGV-0314241_24	KOfam	K24072	xpf; positive control factor	NA
UHGV-0314241_24	PHROG	phrog_1190	RNA polymerase sigma factor	transcription regulation
UHGV-0314241_24	UniRef90	UniRef90_A0A179EV45	Positive control factor	NA
UHGV-0314241_24	eggNOG-mapper	226185.EF_1450	DNA-templated transcription, initiation	NA
UHGV-0314241_24	COG	COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	NA
UHGV-0314241_25	PHROG	phrog_1551	NA	unknown function
UHGV-0314241_25	UniRef90	UniRef90_C9AMY4	Predicted protein	NA
UHGV-0314241_25	Pfam	PF17356	Phage-like element PBSX protein XtrA	PBSX_XtrA
UHGV-0314241_26	PHROG	phrog_20364	NA	unknown function
UHGV-0314241_27	PHROG	phrog_3302	NA	unknown function
UHGV-0314241_27	UniRef90	UniRef90_Q47835	ArpT	NA
UHGV-0314241_27	eggNOG-mapper	1140001.I571_01143	NA	NA
UHGV-0314241_27	Structural annotation	PF09953, MF_00906, NF000331, COG4873	NA	NA
UHGV-0314241_28	PHROG	phrog_7628	NA	unknown function
UHGV-0314241_28	UniRef90	UniRef90_UPI000E0954AD	toxin PIN	NA
UHGV-0314241_29	PHROG	phrog_2955	NA	unknown function
UHGV-0314241_30	PHROG	phrog_10711	NA	unknown function
UHGV-0314241_30	UniRef90	UniRef90_Q47834	ArpS	NA
UHGV-0314241_30	eggNOG-mapper	1104325.M7W_1343	NA	NA
UHGV-0314241_31	eggNOG-mapper	479437.Elen_0814	NA	NA
UHGV-0314241_31	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-0314241_32	PHROG	phrog_2882	DNA methyltransferase	other
UHGV-0314241_32	UniRef90	UniRef90_J7CX26	C-5 cytosine-specific DNA methylase family protein	NA
UHGV-0314241_32	eggNOG-mapper	565653.EGBG_01954	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0314241_32	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0314241_32	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0314241_32	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0314241_33	PHROG	phrog_7773	NA	unknown function
UHGV-0314241_33	UniRef90	UniRef90_A0A7V7KSZ0	Antitoxin	NA
UHGV-0314241_33	eggNOG-mapper	1104325.M7W_2064	NA	NA
UHGV-0314241_33	Structural annotation	PF19824, MF_01506, NF011893	NA	NA
UHGV-0314241_34	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0314241_34	UniRef90	UniRef90_UPI00159A1381	NA	NA
UHGV-0314241_34	eggNOG-mapper	1104325.M7W_1338	NA	NA
UHGV-0314241_34	Pfam	PF06356	NA	DUF1064
UHGV-0314241_34	Structural annotation	PF06356, MF_04160, NF033179, COG2887	NA	NA
UHGV-0314241_35	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0314241_35	UniRef90	UniRef90_R2MBA0	DnaD domain-containing protein	NA
UHGV-0314241_35	eggNOG-mapper	1104325.M7W_1337	Replication initiation and membrane attachment	NA
UHGV-0314241_35	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0314241_35	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0314241_35	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0314241_35	Structural annotation	PF04492, MF_01177, TIGR01610, COG5625	NA	NA
UHGV-0314241_36	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0314241_36	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0314241_36	UniRef90	UniRef90_R2M8D3	Phage RecT family recombinase	NA
UHGV-0314241_36	eggNOG-mapper	1104325.M7W_1336	RecT family	NA
UHGV-0314241_36	Pfam	PF03837	RecT family	RecT
UHGV-0314241_36	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0314241_36	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0314241_36	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0314241_37	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0314241_37	UniRef90	UniRef90_UPI00190EB095	YqaJ viral recombinase family protein	NA
UHGV-0314241_37	eggNOG-mapper	1140001.I571_02083	YqaJ-like viral recombinase domain	NA
UHGV-0314241_37	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0314241_37	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0314241_37	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0314241_37	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0314241_38	PHROG	phrog_4690	NA	unknown function
UHGV-0314241_38	eggNOG-mapper	1158604.I591_00505	NA	NA
UHGV-0314241_39	PHROG	phrog_35588	NA	unknown function
UHGV-0314241_39	eggNOG-mapper	1104325.M7W_1333	NA	NA
UHGV-0314241_40	UniRef90	UniRef90_A0A1X4JFT2	DNA-binding protein	NA
UHGV-0314241_40	eggNOG-mapper	1140001.I571_02081	NA	NA
UHGV-0314241_41	PHROG	phrog_1124	transcriptional regulator	transcription regulation
UHGV-0314241_41	UniRef90	UniRef90_A0A7H4KXZ9	HTH cro/C1-type domain-containing protein	NA
UHGV-0314241_41	eggNOG-mapper	1140001.I571_02080	NA	NA
UHGV-0314241_41	Structural annotation	PF01381, TIGR02607, COG1476	NA	NA
UHGV-0314241_42	PHROG	phrog_1970	NA	unknown function
UHGV-0314241_42	UniRef90	UniRef90_C9AMX1	Predicted protein	NA
UHGV-0314241_42	eggNOG-mapper	1104325.M7W_1330	NA	NA
UHGV-0314241_43	Structural annotation	PF07378, MF_00783, COG5443	NA	NA
UHGV-0314241_44	PHROG	phrog_8019	NA	unknown function
UHGV-0314241_45	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0314241_45	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0314241_45	UniRef90	UniRef90_A0A367CEJ4	HTH cro/C1-type domain-containing protein	NA
UHGV-0314241_45	eggNOG-mapper	1260356.D920_02045	Helix-turn-helix domain	NA
UHGV-0314241_45	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0314241_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0314241_45	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0314241_45	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0314241_46	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0314241_46	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0314241_46	UniRef90	UniRef90_A0A1X4JFT5	Helix-turn-helix transcriptional regulator	NA
UHGV-0314241_46	eggNOG-mapper	768486.EHR_09790	Helix-turn-helix XRE-family like proteins	NA
UHGV-0314241_46	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0314241_46	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0314241_46	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0314241_46	Structural annotation	PF12844, MF_00535, NF041575, COG1396	NA	NA
UHGV-0314241_47	PHROG	phrog_87	metallo-protease	other
UHGV-0314241_47	UniRef90	UniRef90_A0A133MT17	Putative toxin-antitoxin system, toxin component	NA
UHGV-0314241_47	eggNOG-mapper	768486.EHR_09785	IrrE N-terminal-like domain	NA
UHGV-0314241_47	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0314241_47	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0314241_47	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0314241_48	PHROG	phrog_806	NA	unknown function
UHGV-0314241_48	UniRef90	UniRef90_A0A2S7RXL8	NA	NA
UHGV-0314241_48	eggNOG-mapper	768486.EHR_00870	NA	NA
UHGV-0314241_48	Pfam	PF11611	NA	DUF4352
UHGV-0314241_48	Structural annotation	PF11611, MF_00791, NF003967, COG2967	NA	NA
UHGV-0314241_49	KOfam	K14059	int; integrase	NA
UHGV-0314241_49	PHROG	phrog_1	integrase	integration and excision
UHGV-0314241_49	UniRef90	UniRef90_A0A133CEM3	Site-specific integrase	NA
UHGV-0314241_49	eggNOG-mapper	1140001.I571_02070	Phage integrase family	NA
UHGV-0314241_49	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0314241_49	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0314241_49	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0314241_49	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0314241_49	Structural annotation	PF00589, PF14659, PF14657, MF_01808, TIGR02224, COG4974	NA	NA