UHGV-0318591

Genome information

Genome length 26,547 bps

CDS count 43

Completeness 73.13% (medium-quality)

geNomad score 0.9741

Prediction confidence Confident

Genome information
Genome ID	UHGV-0318591
vOTU ID	vOTU-028783
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k141_50974_round8-12~3138585
BioSample	NA
Country	India
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	73.13% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral signal
geNomad score	0.9741
Virus hallmark genes (geNomad)	15
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	57.94
Jumbo phage	No

Genome content
Genome length	26,547 bps
GC content	53.35%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	43
CDS density	93.99%
Average CDS length	584.44 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0318591_1	PHROG	phrog_15609	NA	unknown function
UHGV-0318591_3	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0318591_3	UniRef90	UniRef90_UPI000691E678	helix-turn-helix domain-containing protein	NA
UHGV-0318591_3	eggNOG-mapper	1200557.JHWV01000006_gene1755	NA	NA
UHGV-0318591_3	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0318591_6	PHROG	phrog_989	NA	unknown function
UHGV-0318591_6	UniRef90	UniRef90_A0A357Y2J0	Transcriptional regulator	NA
UHGV-0318591_6	eggNOG-mapper	515620.EUBELI_01804	NA	NA
UHGV-0318591_6	Structural annotation	PF11372	NA	NA
UHGV-0318591_9	PHROG	phrog_398	NA	unknown function
UHGV-0318591_9	UniRef90	UniRef90_UPI0018C6CD3B	putative HNHc nuclease	NA
UHGV-0318591_9	eggNOG-mapper	585503.HMPREF7545_1716	Putative HNHc nuclease	NA
UHGV-0318591_9	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0318591_9	Structural annotation	PF16784	NA	NA
UHGV-0318591_10	PHROG	phrog_4707	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0318591_10	UniRef90	UniRef90_UPI0011C364A6	helix-turn-helix domain-containing protein	NA
UHGV-0318591_10	eggNOG-mapper	742765.HMPREF9457_03058	NA	NA
UHGV-0318591_10	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0318591_10	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0318591_10	Structural annotation	NF040939, COG3355	NA	NA
UHGV-0318591_11	PHROG	phrog_9804	NA	unknown function
UHGV-0318591_11	UniRef90	UniRef90_A0A3M0XFT2	Inhibitor_G39P domain-containing protein	NA
UHGV-0318591_11	eggNOG-mapper	1280706.AUJE01000046_gene1152	NA	NA
UHGV-0318591_11	Structural annotation	PF11417	NA	NA
UHGV-0318591_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0318591_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0318591_12	UniRef90	UniRef90_UPI001D02C67A	single-stranded DNA-binding protein	NA
UHGV-0318591_12	eggNOG-mapper	522772.Dacet_0007	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0318591_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0318591_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0318591_12	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0318591_13	Structural annotation	PF08861, COG5440	NA	NA
UHGV-0318591_17	UniRef90	UniRef90_UPI001D011922	NA	NA
UHGV-0318591_17	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0318591_22	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0318591_22	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0318591_22	UniRef90	UniRef90_A0A356UL78	HNH domain-containing protein	NA
UHGV-0318591_22	eggNOG-mapper	1089548.KI783301_gene3222	HNH endonuclease	NA
UHGV-0318591_22	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0318591_22	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0318591_22	Structural annotation	NF008448	NA	NA
UHGV-0318591_23	PHROG	phrog_1066	NA	unknown function
UHGV-0318591_23	eggNOG-mapper	1232428.CAVO010000003_gene1013	NA	NA
UHGV-0318591_23	Structural annotation	PF05119, TIGR01558	NA	NA
UHGV-0318591_24	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0318591_24	UniRef90	UniRef90_UPI000F8DAF8B	terminase large subunit	NA
UHGV-0318591_24	eggNOG-mapper	1232428.CAVO010000003_gene1012	Phage Terminase	NA
UHGV-0318591_24	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0318591_24	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0318591_24	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0318591_24	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0318591_25	PHROG	phrog_12	portal protein	head and packaging
UHGV-0318591_25	UniRef90	UniRef90_UPI00142FCB51	phage portal protein	NA
UHGV-0318591_25	eggNOG-mapper	1232428.CAVO010000003_gene1011	Phage portal protein	NA
UHGV-0318591_25	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0318591_25	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0318591_25	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0318591_26	KOfam	K06904	NA	NA
UHGV-0318591_26	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0318591_26	UniRef90	UniRef90_A0A412CHQ0	HK97 family phage prohead protease	NA
UHGV-0318591_26	eggNOG-mapper	1235755.ANAM01000006_gene2374	Caudovirus prohead serine protease	NA
UHGV-0318591_26	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0318591_26	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0318591_26	COG	COG3740	Phage head maturation protease	NA
UHGV-0318591_26	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0318591_27	PHROG	phrog_10	major head protein	head and packaging
UHGV-0318591_27	UniRef90	UniRef90_A0A412CI12	Phage major capsid protein	NA
UHGV-0318591_27	eggNOG-mapper	1341151.ASZU01000004_gene260	Phage capsid family	NA
UHGV-0318591_27	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0318591_27	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0318591_27	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0318591_27	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0318591_28	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0318591_28	UniRef90	UniRef90_A0A412CHC9	Phage gp6-like head-tail connector protein	NA
UHGV-0318591_28	eggNOG-mapper	66692.ABC1335	Phage gp6-like head-tail connector protein	NA
UHGV-0318591_28	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0318591_28	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0318591_28	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0318591_29	PHROG	phrog_25	head closure Hc1	connector
UHGV-0318591_29	UniRef90	UniRef90_UPI001648A1FB	phage head closure protein	NA
UHGV-0318591_29	eggNOG-mapper	1232428.CAVO010000003_gene1007	Phage head-tail joining protein	NA
UHGV-0318591_29	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0318591_29	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0318591_29	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0318591_29	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0318591_30	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0318591_30	UniRef90	UniRef90_UPI001645C731	HK97 gp10 family phage protein	NA
UHGV-0318591_30	eggNOG-mapper	1232428.CAVO010000003_gene1006	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0318591_30	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0318591_30	Structural annotation	PF17395, TIGR01725, COG5005	NA	NA
UHGV-0318591_31	PHROG	phrog_525	NA	unknown function
UHGV-0318591_31	eggNOG-mapper	293826.Amet_2419	NA	NA
UHGV-0318591_31	Pfam	PF20765	NA	DUF6838
UHGV-0318591_31	Structural annotation	PF20765, COG5003	NA	NA
UHGV-0318591_32	PHROG	phrog_1480	tail sheath	tail
UHGV-0318591_32	UniRef90	UniRef90_UPI0016491346	phage tail sheath subtilisin-like domain-containing protein	NA
UHGV-0318591_32	eggNOG-mapper	1232428.CAVO010000003_gene1004	Phage tail sheath C-terminal domain	NA
UHGV-0318591_32	Pfam	PF04984	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
UHGV-0318591_32	Pfam	PF17482	Phage tail sheath C-terminal domain	Phage_sheath_1C
UHGV-0318591_32	Structural annotation	PF10758, COG3497	NA	NA
UHGV-0318591_33	PHROG	phrog_365	tail protein	tail
UHGV-0318591_33	UniRef90	UniRef90_A0A2S0M4K4	Phage portal protein	NA
UHGV-0318591_33	eggNOG-mapper	1232428.CAVO010000003_gene1003	Phage tail tube protein	NA
UHGV-0318591_33	Pfam	PF09393	Phage tail tube protein	DUF2001
UHGV-0318591_33	Structural annotation	PF09393, TIGR02241, COG3498	NA	NA
UHGV-0318591_34	PHROG	phrog_389	tail protein XkdN-like	tail
UHGV-0318591_34	UniRef90	UniRef90_UPI001645A435	XkdN-like protein	NA
UHGV-0318591_34	eggNOG-mapper	1232428.CAVO010000003_gene1002	Phage XkdN-like tail assembly chaperone protein, TAC	NA
UHGV-0318591_34	Pfam	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
UHGV-0318591_34	Structural annotation	PF08890	NA	NA
UHGV-0318591_36	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0318591_36	UniRef90	UniRef90_UPI001645A310	phage tail tape measure protein	NA
UHGV-0318591_36	eggNOG-mapper	1232428.CAVO010000003_gene1001	Phage-related minor tail protein	NA
UHGV-0318591_36	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0318591_36	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0318591_36	COG	COG5283	Phage-related tail protein	NA
UHGV-0318591_36	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0318591_37	PHROG	phrog_5184	NA	unknown function
UHGV-0318591_37	UniRef90	UniRef90_A0A0L0W6M8	LysM domain-containing protein	NA
UHGV-0318591_37	eggNOG-mapper	1232428.CAVO010000003_gene1000	LysM domain	NA
UHGV-0318591_37	Pfam	PF21821	Dit-like phage tail protein	Dit_like
UHGV-0318591_37	COG	COG1652	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	NA
UHGV-0318591_37	Structural annotation	PF19266, TIGR02126, COG3499	NA	NA
UHGV-0318591_38	PHROG	phrog_400	tail protein	tail
UHGV-0318591_38	UniRef90	UniRef90_A0A848BXY8	Lytic transglycosylase domain-containing protein	NA
UHGV-0318591_38	eggNOG-mapper	1232428.CAVO010000003_gene999	NLP P60 protein	NA
UHGV-0318591_38	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0318591_38	Structural annotation	PF14594, PF00877, NF033848, NF008096, COG3500	NA	NA
UHGV-0318591_39	PHROG	phrog_579	NA	unknown function
UHGV-0318591_39	UniRef90	UniRef90_UPI0016483798	NA	NA
UHGV-0318591_39	eggNOG-mapper	1123250.KB908414_gene2116	NA	NA
UHGV-0318591_39	Pfam	PF10844	NA	DUF2577
UHGV-0318591_39	Structural annotation	PF10844, TIGR00523	NA	NA
UHGV-0318591_40	PHROG	phrog_120	baseplate protein	tail
UHGV-0318591_40	UniRef90	UniRef90_UPI001646EAB8	NA	NA
UHGV-0318591_40	eggNOG-mapper	1232428.CAVO010000003_gene997	NA	NA
UHGV-0318591_40	Pfam	PF10934	NA	DUF2634
UHGV-0318591_40	COG	COG3628	Phage baseplate assembly protein W	NA
UHGV-0318591_40	Structural annotation	PF10934, MF_02010, TIGR03357, COG3628	NA	NA
UHGV-0318591_41	PHROG	phrog_6	baseplate protein	tail
UHGV-0318591_41	UniRef90	UniRef90_UPI0016450683	baseplate J/gp47 family protein	NA
UHGV-0318591_41	eggNOG-mapper	1232428.CAVO010000003_gene996	Baseplate J-like protein	NA
UHGV-0318591_41	Pfam	PF04865	Baseplate J-like protein	Baseplate_J
UHGV-0318591_41	COG	COG3299	NA	NA
UHGV-0318591_41	Structural annotation	PF04865, PF21379, MF_04102, TIGR02243, COG3299	NA	NA
UHGV-0318591_42	PHROG	phrog_521	tail protein	tail
UHGV-0318591_42	UniRef90	UniRef90_A0A848EVX3	NA	NA
UHGV-0318591_42	eggNOG-mapper	1111454.HMPREF1250_0200	NA	NA
UHGV-0318591_42	Pfam	PF10076	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
UHGV-0318591_42	COG	COG3778	NA	NA
UHGV-0318591_42	Structural annotation	PF10076, COG3778	NA	NA
UHGV-0318591_43	PHROG	phrog_7037	tail fiber protein	tail
UHGV-0318591_43	UniRef90	UniRef90_UPI000486D8B9	phage tail protein	NA
UHGV-0318591_43	eggNOG-mapper	1232428.CAVO010000003_gene994	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0318591_43	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-0318591_43	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0318591_43	Structural annotation	PF12571	NA	NA