UHGV-0332594

Genome information

Genome length 20,878 bps

CDS count 23

Completeness 52.49% (medium-quality)

geNomad score 0.9778

Prediction confidence Confident

Genome information
Genome ID	UHGV-0332594
vOTU ID	vOTU-030492
vOTU representative	Yes
Source dataset	mMGE
Original genome ID	k119_41355_round8-12~3150905
BioSample	NA
Country	Russia
Virus prediction confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	52.49% (medium-quality)
CheckV contamination	0.00%
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	1
Recoded stop codon	No

Viral signal
geNomad score	0.9778
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	51.88
Jumbo phage	No

Genome content
Genome length	20,878 bps
GC content	36.86%
Genetic code	The standard bacterial, archaeal and plant plastid code (11)
CDS count	23
CDS density	97.87%
Average CDS length	892.57 bps
tRNA count	0
Suppressor tRNA genes	0

Genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0332594_1	PHROG	phrog_1889	terminase small subunit	head and packaging
UHGV-0332594_1	UniRef90	UniRef90_UPI001B35D96A	phage terminase small subunit	NA
UHGV-0332594_1	eggNOG-mapper	1104325.M7W_1350	Phage terminase small subunit	NA
UHGV-0332594_1	NCBIFam	NF040601.1	phage terminase small subunit	NA
UHGV-0332594_1	COG	COG5484	NA	NA
UHGV-0332594_2	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0332594_2	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0332594_2	UniRef90	UniRef90_S4EAE9	Phage terminase, large subunit, PBSX family	NA
UHGV-0332594_2	eggNOG-mapper	1158614.I592_01117	Terminase RNAseH like domain	NA
UHGV-0332594_2	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0332594_2	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0332594_2	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0332594_2	COG	COG1783	Phage terminase large subunit	NA
UHGV-0332594_2	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0332594_3	PHROG	phrog_533	portal protein	head and packaging
UHGV-0332594_3	UniRef90	UniRef90_A0A3F3LAK1	Phage portal protein	NA
UHGV-0332594_3	eggNOG-mapper	1158614.I592_01118	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0332594_3	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0332594_3	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0332594_3	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0332594_4	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0332594_4	UniRef90	UniRef90_S4EI20	Phage minor capsid protein 2	NA
UHGV-0332594_4	eggNOG-mapper	1140001.I571_02107	Phage minor capsid protein 2	NA
UHGV-0332594_4	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0332594_4	Structural annotation	PF06152	NA	NA
UHGV-0332594_5	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0332594_5	UniRef90	UniRef90_S4E2G7	Phage minor structural protein GP20	NA
UHGV-0332594_5	eggNOG-mapper	1158614.I592_01120	Phage minor structural protein GP20	NA
UHGV-0332594_5	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0332594_5	Structural annotation	PF06810	NA	NA
UHGV-0332594_6	PHROG	phrog_422	major head protein	head and packaging
UHGV-0332594_6	UniRef90	UniRef90_A0A829A4D2	BIG2 domain-containing protein	NA
UHGV-0332594_6	eggNOG-mapper	1158614.I592_01121	NA	NA
UHGV-0332594_6	Structural annotation	PF20911	NA	NA
UHGV-0332594_7	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0332594_7	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0332594_7	UniRef90	UniRef90_A0A2G0EAS3	BIG2 domain-containing protein	NA
UHGV-0332594_7	eggNOG-mapper	1140001.I571_01157	domain, Protein	NA
UHGV-0332594_7	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0332594_7	COG	COG5492	NA	NA
UHGV-0332594_7	Structural annotation	PF02368	NA	NA
UHGV-0332594_8	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0332594_8	UniRef90	UniRef90_A0A0B8QYX3	Coenzyme F420-reducing hydrogenase, beta subunit	NA
UHGV-0332594_8	eggNOG-mapper	1140001.I571_02111	NA	NA
UHGV-0332594_9	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0332594_9	UniRef90	UniRef90_UPI00090013CF	putative minor capsid protein	NA
UHGV-0332594_9	eggNOG-mapper	1140001.I571_02112	Minor capsid protein	NA
UHGV-0332594_9	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0332594_9	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0332594_10	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0332594_10	UniRef90	UniRef90_A0A345FQJ7	Capsid protein	NA
UHGV-0332594_10	eggNOG-mapper	1140001.I571_02113	Minor capsid protein	NA
UHGV-0332594_10	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0332594_10	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0332594_11	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0332594_11	UniRef90	UniRef90_UPI0018A2E21A	capsid protein	NA
UHGV-0332594_11	eggNOG-mapper	1140001.I571_02114	Minor capsid protein from bacteriophage	NA
UHGV-0332594_11	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0332594_11	Structural annotation	PF12691	NA	NA
UHGV-0332594_12	PHROG	phrog_820	major tail protein	tail
UHGV-0332594_12	UniRef90	UniRef90_A0A345FQJ9	Capsid protein	NA
UHGV-0332594_12	eggNOG-mapper	1140001.I571_02115	domain, Protein	NA
UHGV-0332594_12	COG	COG5492	NA	NA
UHGV-0332594_12	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0332594_14	PHROG	phrog_10257	minor head protein	head and packaging
UHGV-0332594_14	UniRef90	UniRef90_C9AN01	Predicted protein	NA
UHGV-0332594_14	eggNOG-mapper	1104325.M7W_1363	NA	NA
UHGV-0332594_14	Structural annotation	PF10666	NA	NA
UHGV-0332594_15	PHROG	phrog_706	NA	unknown function
UHGV-0332594_15	UniRef90	UniRef90_C9AN02	Bacteriophage Gp15 protein	NA
UHGV-0332594_15	eggNOG-mapper	1104325.M7W_1364	Bacteriophage Gp15 protein	NA
UHGV-0332594_15	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0332594_15	Structural annotation	PF06854	NA	NA
UHGV-0332594_16	KOfam	K08757	APOA1; apolipoprotein A-I	NA
UHGV-0332594_16	PHROG	phrog_167	tail length tape measure protein	tail
UHGV-0332594_16	UniRef90	UniRef90_U2QDL4	TMP_3 domain-containing protein	NA
UHGV-0332594_16	eggNOG-mapper	1140001.I571_02119	Transglycosylase SLT domain	NA
UHGV-0332594_16	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0332594_16	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0332594_16	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0332594_16	Structural annotation	PF20155, PF18013, TIGR01760, COG3941, COG3953	NA	NA
UHGV-0332594_17	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0332594_17	UniRef90	UniRef90_S4FH66	Phage tail component protein	NA
UHGV-0332594_17	eggNOG-mapper	1104325.M7W_1366	Phage tail protein	NA
UHGV-0332594_17	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0332594_17	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0332594_18	PHROG	phrog_326	tail protein with endopeptidase domain	other
UHGV-0332594_18	UniRef90	UniRef90_A0A8A8G701	Phage tail protein	NA
UHGV-0332594_18	eggNOG-mapper	1140001.I571_02121	Prophage endopeptidase tail	NA
UHGV-0332594_18	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0332594_18	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0332594_18	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0332594_18	COG	COG4926	Phage-related protein	NA
UHGV-0332594_18	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0332594_19	PHROG	phrog_4577	tail protein	tail
UHGV-0332594_19	eggNOG-mapper	1104325.M7W_1368	NA	NA
UHGV-0332594_19	Structural annotation	NF041901	NA	NA
UHGV-0332594_20	PHROG	phrog_10054	NA	unknown function
UHGV-0332594_20	UniRef90	UniRef90_A0A133MSY7	BppU_N domain-containing protein	NA
UHGV-0332594_20	eggNOG-mapper	1104325.M7W_1369	InterPro IPR018913 Domain of	NA
UHGV-0332594_20	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0332594_20	Pfam	PF12708	Pectate lyase superfamily protein	Pectate_lyase_3
UHGV-0332594_21	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-0332594_21	PHROG	phrog_33173	NA	unknown function
UHGV-0332594_21	UniRef90	UniRef90_A0A3F3LIJ6	SGNH_hydro domain-containing protein	NA
UHGV-0332594_21	eggNOG-mapper	1121105.ATXL01000047_gene725	GDSL-like Lipase/Acylhydrolase family	NA
UHGV-0332594_21	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0332594_21	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0332594_22	PHROG	phrog_689	holin	lysis
UHGV-0332594_22	UniRef90	UniRef90_A0A1L8WAB0	Holin	NA
UHGV-0332594_22	eggNOG-mapper	1158602.I590_03012	Haemolysin XhlA	NA
UHGV-0332594_22	Pfam	PF10779	Haemolysin XhlA	XhlA
UHGV-0332594_23	PHROG	phrog_881	holin	lysis
UHGV-0332594_23	UniRef90	UniRef90_C9AN11	Holin	NA
UHGV-0332594_23	eggNOG-mapper	768486.EHR_09645	Putative phage holin Dp-1	NA
UHGV-0332594_23	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1